Seasonal oxygen depletion (hypoxia) in coastal bottom waters can lead to the release and persistence of free sulfide (euxinia), which is highly detrimental to marine life. Although coastal hypoxia is relatively common, reports of euxinia are less frequent, which suggests that certain environmental controls can delay the onset of euxinia. However, these controls and their prevalence are poorly understood. Here we present field observations from a seasonally hypoxic marine basin (Grevelingen, The Netherlands), which suggest that the activity of cable bacteria, a recently discovered group of sulfur-oxidizing microorganisms inducing long-distance electron transport, can delay the onset of euxinia in coastal waters. Our results reveal a remarkable seasonal succession of sulfur cycling pathways, which was observed over multiple years. Cable bacteria dominate the sediment geochemistry in winter, whereas, after the summer hypoxia, Beggiatoaceae mats colonize the sediment. The specific electrogenic metabolism of cable bacteria generates a large buffer of sedimentary iron oxides before the onset of summer hypoxia, which captures free sulfide in the surface sediment, thus likely preventing the development of bottom water euxinia. As cable bacteria are present in many seasonally hypoxic systems, this euxiniapreventing firewall mechanism could be widely active, and may explain why euxinia is relatively infrequently observed in the coastal ocean. sediment biogeochemistry | cable bacteria | coastal hypoxia | sulfur cycling | microbial competition

Estuarine sediments are critical for the remediation of large amounts of anthropogenic nitrogen (N) loading via production of N 2 from nitrate by denitrification. However, nitrate is also recycled within sediments by dissimilatory nitrate reduction to ammonium (DNRA). Understanding the factors that influence the balance between denitrification and DNRA is thus crucial to constraining coastal N budgets. A potentially important factor is the availability of different electron donors (organic carbon, reduced iron and sulfur). Both denitrification and DNRA may be linked to ferrous iron oxidation, however the contribution of Fe(II)-fueled nitrate reduction in natural environments is practically unknown. This study investigated how nitratedependent Fe 21 oxidation affects the partitioning between nitrate reduction pathways using 15 N-tracing methods in sediments along the salinity gradient of the periodically hypoxic Yarra River estuary, Australia. Increased dissolved Fe 21 availability resulted in significant enhancement of DNRA rates from around 10-20% total nitrate reduction in control incubations to over 40% in those with additional Fe 21 , at several sites.Increases in DNRA at some locations were accompanied by reductions in denitrification. Significant correlations were observed between Fe 21 oxidation and DNRA rates, with reaction ratios corresponding to the stoichiometry of Fe 21

Abstract. Recently, long filamentous bacteria have been reported conducting electrons over centimetre distances in marine sediments. These so-called cable bacteria perform an electrogenic form of sulfur oxidation, whereby long-distance electron transport links sulfide oxidation in deeper sediment horizons to oxygen reduction in the upper millimetres of the sediment. Electrogenic sulfur oxidation exerts a strong impact on the local sediment biogeochemistry, but it is currently unknown how prevalent the process is within the seafloor. Here we provide a state-of-the-art assessment of its global distribution by combining new field observations with previous reports from the literature. This synthesis demonstrates that electrogenic sulfur oxidation, and hence microbial long-distance electron transport, is a widespread phenomenon in the present-day seafloor. The process is found in coastal sediments within different climate zones (off the Netherlands, Greenland, the USA, Australia) and thrives on a range of different coastal habitats (estuaries, salt marshes, mangroves, coastal hypoxic basins, intertidal flats). The combination of a widespread occurrence and a strong local geochemical imprint suggests that electrogenic sulfur oxidation could be an important, and hitherto overlooked, component of the marine cycle of carbon, sulfur and other elements.

Abstract. The size distribution and mean spatial trends of large particles (>100 µm, in equivalent spherical diameter, ESD) and mesozooplankton were investigated across the Mackenzie Shelf (southeast Beaufort Sea, Arctic Ocean) in July-August 2009. Our main objective was to combine results from an Underwater Vision Profiler 5 (UVP5) and traditional net tows (200 µm mesh size) to characterize the structural diversity and functioning of the Arctic shelf-basin ecosystem and to assess the large-scale correspondence between the two methodological approaches. The core dataset comprised 154 UVP5 profiles and 29 net tows conducted in the shelf (<100 m isobath), slope (100-1000 m) and basin (>1000 m) regions of the study area. The mean abundance of total particles and zooplankton in the upper water column (<75 m depth) declined exponentially with increasing distance from shore. Vertical and latitudinal patterns in total particle concentration followed those of chlorophyll a (chl a) concentration, with maximum values between 30 and 70 m depth. Based on the size-spectra derived from the UVP5 dataset, living organisms (0.1-10 mm ESD) accounted for an increasingly large proportion of total particle abundance (from 0.1 % to >50 %) when progressing offshore and as the ESD of particles was increasing. Both the UVP5 and net tows determined that copepods dominated the zooplankton community (∼78-94 % by numbers) and that appendicularians were generally the second most abundant group (∼1-11 %). The vertical distribution patterns of copepods and appendicularians indicated a close association between primary production and the main grazers. Manual taxonomic counts and ZooScan image analyses shed further light on the size-structure and composition of the copepod community -which was dominated at ∼95 % by a guild of 10 typical taxa. The size distributions of copepods, as evaluated with the 3 methods (manual counts, ZooScan and UVP5), showed consistent patterns co-varying in the same order of magnitude over the upper size range (>1 mm ESD). Copepods <1 mm were not well quantified by the UVP5, which estimated that only ∼13-25 % of the assemblage was composed of copepods <1 mm ESD compared with ∼77-89 % from the net tow estimates. However, the biovolume of copepods was overwhelmingly dominated (∼93-97 %) by copepods >1 mm ESD. Our results illustrate that the combination of traditional sampling methods and automated imaging techniques is a powerful approach that enabled us to conclude on the prevalence of a relatively high productivity regime and dominant herbivorous food web over the shelf when compared with the low-productive recycling system detected offshore.