1. Large river floodplains are considered key nursery habitats for many species of riverine fish. The lower Volga River floodplains (Russian Federation) are still relatively undisturbed, serving as a suitable model for studying the influence of flooding and temperature on fish recruitment in floodplain rivers. 2. We examined the interannual variability in recruitment success of young-of-the-year (YOY) fish in the lower Volga floodplain in relation to flood pulse characteristics and rising water temperatures in the spring. We sampled four areas with different flooding regimes, in three consecutive years (2006)(2007)(2008). 3. Extensive areas with a long duration of flooding accommodated high densities of young fish. This suggests that extended inundation improves the recruitment success of river fish. In areas with extensive flooding, the biomass of YOY of most fish species was about three times higher in 2006 and 2007 than in 2008. We hypothesise that low spring temperatures in 2008 may have caused this reduced recruitment and that a flood synchronised with rising temperature enhances recruitment success. 4. Extensive flooding was particularly favourable for species characterised by large body size, delayed maturation, high fecundity and low parental investment, such as pike Esox lucius, roach Rutilus rutilus and ide Leuciscus idus. Gibel carp Carassius gibelio, a species tolerant of high temperature and hypoxia, did particularly well in small waterbodies in the driest parts of the floodplain. 5. Structural characteristics of floodplain waterbodies explained much of YOY fish density. These species-environment associations varied from year to year, but some species such as common bream Abramis brama, roach and gibel carp showed consistent relationships with structural habitat characteristics in all years, despite large interannual fluctuations in flood pulse and spring temperature.

Understanding the evolutionary mechanisms that affect the genetic divergence between diadromous and resident populations across heterogeneous environments is a challenging task. While diadromy may promote gene flow leading to a lack of genetic differentiation among populations, resident populations tend to be affected by local adaptation and/or plasticity. Studies on these effects on genomic divergence in nonmodel amphidromous species are scarce. Galaxias maculatus, one of the most widespread fish species in the Southern Hemisphere, exhibits two life histories, an ancestral diadromous, specifically, amphidromous form, and a derived freshwater resident form. We examined the genetic diversity and divergence among 20 estuarine and resident populations across the Chilean distribution of G. maculatus and assessed the extent to which selection is involved in the differentiation among resident populations. We obtained nearly 4,400 SNP markers using a RADcap approach for 224 individuals. As expected, collections from estuarine locations typically consist of diadromous individuals. Diadromous populations are highly differentiated from their resident counterparts by both neutral and putative adaptive markers. While diadromous populations exhibit high gene flow and lack site fidelity, resident populations appear to be the product of different colonization events with relatively low genetic diversity and varying levels of gene flow. In particular, the northernmost resident populations were clearly genetically distinct and reproductively isolated from each other suggesting local adaptation. Our study provides insights into the role of life history differences in the maintenance of genetic diversity and the importance of genetic divergence in species evolution.

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1. Floodplains are a key habitat for foraging, spawning and as a nursery for many riverine fish species. The lower Volga floodplains (Russian Federation) are still relatively undisturbed, while in Europe and North America, about 90% of floodplains have effectively been lost. 2. We examined relationships between the extent and timing of the spring flood, lateral spawning movements of fish species and timing and duration of spawning in the floodplain by sampling during spring 2006 and 2007. 3. Only the spawning of rheophilic species, that released their eggs in the floodplain, coincided with the flood. In contrast, the timing of spawning by eurytopic and limnophilic species was unrelated to flooding. 4. For most fish species, we found no indication that the majority of spawners in the floodplain originated from the main river channel, with the exception of sabrefish Pelecus cultratus. 5. We postulate that in the vast Volga-Akhtuba floodplain, fish spawning stocks mainly originate from permanent floodplain waterbodies, whereas hydrological conditions are dominated by the river. Both the river and waterbodies on the floodplain may serve as sources for recolonisation after local extinction because of extreme environmental conditions, such as freezing or desiccation.

Summary Large river–floodplain systems are characterised by seasonal flow variability. High flows lead to hydrological connection between the main channel and inundated off‐channel lakes, wetlands and floodplains, which provide essential habitats for riverine biota. We tested the following hypotheses: (i) that crustacean zooplankton are more abundant in connected lentic habitats such as riverine lakes and wetlands and have a different community composition compared with the main channel and (ii) that vegetation structure will moderate abundances of crustacean zooplankton in the lower reaches of the Waikato River, New Zealand. Zooplankton densities in main channel inflows and inundated floodplains showed clear seasonal changes, with cladoceran and copepod abundance peaks occurring in the majority of sites 2–3 weeks following the peak spring discharges (coinciding with the retreat of water from floodplains into the main channel). Mean densities of zooplankton were highest in the inflows originating from riverine lakes (10–20 ind. L−1) where rotifers were dominant. We recorded significantly higher abundances of copepods in peat bog and swamp wetland inflows (c. 5 ind. L−1) relative to the main river channel and riverine lake inflows (0.1–1 ind. L−1). Some lake inflows also had high numbers of cladocerans (5–10 ind. L−1). Inundated floodplains displayed heterogeneity in zooplankton community composition in relation to their structural complexity. Flooded forest accommodated higher numbers of copepods (c. 8 ind. L−1) and cladocerans (c. 17 ind. L−1) than flooded grassland, where zooplankton assemblages resembled those in the main river channel and were characterised by dominance of rotifers and low overall zooplankton densities (1–2 ind. L−1). Our results suggest that seasonal flow and flood pulses, which determine the degree of connectivity of the main channel with the floodplain and off‐channel habitats, govern zooplankton densities and community structure in this large temperate river. Furthermore, the structural complexity of floodplain habitats may play an important role in enhancing riverine zooplankton diversity. We postulate that the post‐flood peak of large‐bodied cladocerans and copepods might have historically played an important role in the provision of food for juvenile fish such as migrating Galaxiidae.

Natural river‐floodplain systems are characterized by their dynamic hydrology and diverse geomorphology resulting in a wide range of habitats that support high fish diversity and production. Various factors (e.g. hydrological dynamics, water quality, and biotic processes) have been proposed to explain fish distribution in large river floodplains, but it is still widely acknowledged that the mechanisms involved may vary in diverse floodplain systems and that they are not fully understood. To determine how flooding dynamics and floodplain geomorphology influence fish species distributions across the Volga‐Akhtuba floodplain, Russian Federation, we examined the distributions of eight species with respect to variables reflecting floodplain hydrology and geomorphology. On the basis of fish catches in 40 floodplain water bodies at the end of summer in 2006–2008, we found that frequency of occurrence of most fish species remained stable along the time. The distribution of fish species was strongly influenced by the size and shape of water bodies as well as flood extent. Therefore, the long‐term flood variability that drives the geomorphic heterogeneity of the floodplain creates suitable habitats across ranges of fish flow guilds (rheophilic, eurytopic, and limnophilic), resulting in high diversity of the floodplain ichthyofauna. We conclude that this diverse habitat availability is a highly significant factor influencing fish distribution in the Volga‐Akhtuba floodplain. Copyright © 2012 John Wiley & Sons, Ltd.

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Periodic flooding plays a key role in the ecology of floodplain rivers. Damming of such rivers can disturb flooding patterns and have a negative impact on commercial fish yield. The Volga River, the largest river in Europe, has a regulated flow regime after completion of a cascade of dams. Here, we study effects of damming on long-term discharge variability and flood pulse characteristics. In addition, we evaluate the effects of the altered flood pulse on floodplain ecosystem functioning and commercial fish yields. Our results indicate that both flood pulse and fish populations of the Volga-Akhtuba floodplain have varied considerably over the past decades. After damming, annual maximum peak discharges have decreased, minimum discharges increased, but average discharges remained similar to pre-damming conditions. Moreover, because of bed level incision of over 1.5 m, a higher discharge is needed to reach bankfull level and inundate the floodplains. Despite this significantly altered hydrological regime and subsequent morphological changes, current discharge management still provides significant spring flooding. However, commercial fish catches did decrease after damming, both in the main channel and in the floodplain lakes. All catches were dominated by species with a eurytopic flow preference, although catches from the main channel contained more rheophilic species, and floodplain catches contained more limnophilic and phytophilic species. The strong increase of opportunistic gibel carp (Carassius gibelio) around 1985 was apparent in the main channel and the floodplain lakes. Despite the hydrological changes, the decrease in overall catches, and the upsurge of gibel, we found a strong positive effect of flood magnitude in the previous year on commercial fish yield in the floodplain lakes. This suggests that under the current discharge management there still is an increased fish growth and/or survival during high floods and that functioning of the floodplain is at least partly intact.