X-ray absorption Fe-K edge data on ferrous and ferric model complexes have been studied to establish a detailed understanding of the 1s f 3d pre-edge feature and its sensitivity to the electronic structure of the iron site. The energy position and splitting, and intensity distribution, of the pre-edge feature were found to vary systematically with spin state, oxidation state, geometry, and bridging ligation (for binuclear complexes). A methodology for interpreting the energy splitting and intensity distribution of the 1s f 3d pre-edge features was developed for highspin ferrous and ferric complexes in octahedral, tetrahedral, and square pyramidal environments and low-spin ferrous and ferric complexes in octahedral environments. In each case, the allowable many-electron excited states were determined using ligand field theory. The energies of the excited states were calculated and compared to the energy splitting in the 1s f 3d pre-edge features. The relative intensities of electric quadrupole transitions into the manyelectron excited states were obtained and compared to the intensity pattern of the pre-edge feature. The effects of distorting the octahedral iron site to tetrahedral and square pyramidal geometries were analyzed. The contributions to the pre-edge intensity from both electric quadrupole and electric dipole (from 3d-4p mixing) intensity mechanisms were established for these distorted cases; the amount of 4p character and its distribution over the many-electron final states were experimentally estimated and compared to theoretical predictions from density functional calculations. The methodology was also applied to binuclear complexes, and a clear marker for the presence of a µ-oxo Fe-O-Fe bridge was established. General trends in 3d-4p mixing are developed and discussed for a series of geometries and oxidation states of Fe complexes. The results presented should further aid in the interpretation of the 1s f 3d pre-edge region of iron complexes and non-heme iron enzymes.

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X-ray lasers offer new capabilities in understanding the structure of biological systems, complex materials and matter under extreme conditions1–4. Very short and extremely bright, coherent X-ray pulses can be used to outrun key damage processes and obtain a single diffraction pattern from a large macromolecule, a virus or a cell before the sample explodes and turns into plasma1. The continuous diffraction pattern of non-crystalline objects permits oversampling and direct phase retrieval2. Here we show that high-quality diffraction data can be obtained with a single X-ray pulse from a non-crystalline biological sample, a single mimivirus particle, which was injected into the pulsed beam of a hard-X-ray free-electron laser, the Linac Coherent Light Source5. Calculations indicate that the energy deposited into the virus by the pulse heated the particle to over 100,000 K after the pulse had left the sample. The reconstructed exit wavefront (image) yielded 32-nm full-period resolution in a single exposure and showed no measurable damage. The reconstruction indicates inhomogeneous arrangement of dense material inside the virion. We expect that significantly higher resolutions will be achieved in such experiments with shorter and brighter photon pulses focused to a smaller area. The resolution in such experiments can be further extended for samples available in multiple identical copies.

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