The structure of mastoparan-X (MP-X), a G-protein activating peptide from wasp venom, in the state tightly bound to anionic phospholipid bilayers was determined by solid-state NMR spectroscopy. Carbon-13 and nitrogen-15 NMR signals of uniformly labeled MP-X were completely assigned by multidimensional intraresidue C-C, N-CalphaCbeta, and N-Calpha-C', and interresidue Calpha-CalphaCbeta, N-CalphaCbeta, and N-C'-Calpha correlation experiments. The backbone torsion angles were predicted from the chemical shifts of 13C', 13Calpha, 13Cbeta, and 15N signals with the aid of protein NMR database programs. In addition, two 13C-13C and three 13C-15N distances between backbone nuclei were precisely measured by rotational resonance and REDOR experiments, respectively. The backbone structure of MP-X was determined from the 26 dihedral angle restraints and five distances with an average root-mean-square deviation of 0.6 A. Peptide MP-X in the bilayer-bound state formed an amphiphilic alpha-helix for residues Trp3-Leu14 and adopted an extended conformation for Asn2. This membrane-bound conformation is discussed in relation to the peptide's activities to form pores in membranes and to activate G-proteins. This study demonstrates the power of multidimensional solid-state NMR of uniformly isotope-labeled molecules and distance measurements for determining the structures of peptides bound to lipid membranes.
An extensive experimental study is performed to confirm fundamental resonance bands of an intense hadron beam propagating through an alternating gradient linear transport channel. The present work focuses on the most common lattice geometry called "FODO" or "doublet" that consists of two quadrupoles of opposite polarities. The tabletop ion-trap system "S-POD" (Simulator of Particle Orbit Dynamics) developed at Hiroshima University is employed to clarify the parameter-dependence of coherent beam instability. S-POD can provide a non-neutral plasma physically equivalent to a chargedparticle beam in a periodic focusing potential. In contrast with conventional experimental approaches relying on large-scale machines, it is straightforward in S-POD to control the doublet geometry characterized by the quadrupole filling factor and drift-space ratio. We verify that the resonance feature does not essentially change depending on these geometric factors. A few clear stop bands of low-order resonances always appear in the same pattern as previously found with the sinusoidal focusing model. All stop bands become widened and shift to the higher-tune side as the beam density is increased. In the spacecharge-dominated regime, the most dangerous stop band is located at the bare betatron phase advance slightly above 90 degrees. Experimental data from S-POD suggest that this severe resonance is driven mainly by the linear self-field potential rather than by nonlinear external imperfections and, therefore, unavoidable at high beam density. The instability of the third-order coherent mode generates relatively weak but noticeable stop bands near the phase advances of 60 and 120 degrees. The latter sextupole stop band is considerably enhanced by lattice imperfections. In a strongly asymmetric focusing channel, extra attention may have to be paid to some coupling resonance lines induced by the Coulomb potential. Our interpretations of experimental data are supported by theoretical predictions and systematic multiparticle simulations.
The effect of resonance crossing on beam stability is studied systematically by employing a novel tabletop experimental tool and a multiparticle simulation code. A large number of ions are confined in a compact linear Paul trap to reproduce the collective beam behavior. We can prove that the ion plasma in the trap is physically equivalent to a charged-particle beam propagating through a strong focusing channel. The plasma confinement force is quickly ramped such that the trap operating point traverses linear and nonlinear resonance stop bands. Assuming a nonscaling fixed field alternating gradient accelerator composed of many identical FODO cells, we measure how much ion losses occur under diverse conditions. It is experimentally and numerically demonstrated that too slow resonance crossing leads to significant ion losses as expected. Particular attention must be paid to the linear coherent resonance excited at a quarter-integer tune. When the beam intensity is high, this type of linear stop band can seriously affect the beam quality even for rather fast resonance crossing. A scaling law is given of the emittance growth caused by the quarter-integer resonance crossing.
This paper addresses a detailed experimental study of collective instability bands generated near every half-integer tune per lattice period by coherent dipole and quadrupole resonances. Both instabilities appear side by side or overlap each other but are mostly separable because the dipole resonance often creates a narrower stop band accompanied by more severe particle losses. The separation of these low-order resonance bands becomes greater as the beam intensity increases. In principle, the double stop-band structure can be formed even without machine imperfections when the beam's initial phase-space profile is deviated from the ideal stationary distribution. The tabletop ion-trap system called "S-POD" is employed to experimentally demonstrate the parameter dependence of the double stop-band structure. Numerical simulations are also performed for comparison with experimental observations.
These results suggest that excessive portal flow is attributed to post transplant liver dysfunction after extreme small-for-size liver transplantation caused by sinusoidal microcirculatory injury.
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