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The persistence of genetic damage produced by alkylating agents 1 as well as the antagonism of essential biochemical processes such as transcription can have lethal consequences for malignant cells. 2 Both mechanisms have been identified in studies to uncover the reasons for the efficacy of cisplatin in the treatment of several cancers. 2a, 3 We describe a synthetic strategy to create bifunctional molecules that produce DNA adducts capable of binding the estrogen receptor (ER), which is aberrantly expressed in many breast cancer cells. 4 It is speculated that DNA adducts that form complexes with the ER will be poorly repaired in these cells because they are camouflaged from detection by DNA repair enzymes. Consequently, the DNA lesions persist. Furthermore, the DNA adducts would be expected to act as "molecular decoys" capable of displacing the ER from its natural targets and antagonizing its role in malignant growth. In healthy cells, where the abundance of the ER is minimal, no such ER-DNA adduct complexes will be present, and the cell should survive. 5 In this report we describe the design and synthesis of compound 1, a bifunctional agent that can form covalent DNA adducts capable of binding the ER with high affinity and specificity. We show that 1 has selective toxicity toward ER+ breast cancer cells compared to ER-cells in vitro.Compound 1 consists of a bis-chloroethyl aniline mustard as the DNA alkylating unit tethered to estradiol, the natural ligand for the ER. The site of substitution of estradiol in 1 was based on reports that relatively large alkyl groups can be attached at the 7α position with retention of high affinity for the ER 6 . The synthetic strategy for 1 is shown in Scheme 1. Compound 7, a key compound in the synthesis, was prepared by a modification of a published strategy. 7 Briefly, 3 was functionalized with a 6-carbon chain at the 7-position in α-stereochemistry to provide the alkenyl steroid 4. Efficient reduction of the 6-oxo group in 4 was achieved with Et 3 SiH/BF 3 .Et 2 O; however, this treatment also caused the loss of 3,17-tetrahydropyranoxy (THP) groups producing diol 5. The 3,17-OHs of 5 were reprotected with THP groups to afford 6, followed by oxidation of the alkene at the terminus of the linker to provide alcohol 7. Steroid alcohol 7 was converted to bromide 8, which was subsequently allowed to react with a protected ethanolamine to give 9. Compound 9 was desilylated with tetrabutylammonium fluoride (TBAF) and converted to a carbonate Next, the ability of 1 to modify DNA covalently was investigated. Plasmid DNA was incubated with 100 μM [ 14 C]-1 10 at 37 °C for up to 6 h. After unbound 1 was removed by phenol-CHCl 3 extraction and ethanol precipitation, the radioactivity associated with DNA was measured. The amount of radioactivity bound to DNA increased at a constant rate over the 6-h period indicating the formation of covalently bound 1 (see Supporting Information). Based on previous studies on DNA alkylation by nitrogen mustards, 11 it is likely that covalent adducts of...

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The goal of our work was the design of DNA-damaging agents that disrupt both DNA repair and signaling pathways in prostate tumor cells. A DNA alkylator (N,N-bis-2-chloroethyl aniline) was linked to a steroid ligand (17beta-hyroxy-estra-Delta(4(5),9(10))-3-one) to produce a complex molecule (11beta-dichloro) that forms DNA adducts that bind the androgen receptor (AR). We speculated that DNA adducts in an AR-DNA adduct complex would be camouflaged from DNA repair proteins that would otherwise remove the adducts in prostate cancer cells. Furthermore, transcription dependent on the AR would be antagonized by AR redistribution to sites distant from AR-driven promoters. The anticancer potential of 11beta-dichloro was demonstrated against prostate cancer cells in vitro and in vivo. 11beta-dichloro induces a unique pattern of gene disruption, induces apoptosis in apoptosis-resistant cells, and shows promising anticancer activity in animals.

We describe successful efforts to optimize the in vivo profile and address off-target liabilities of a series of BACE1 inhibitors represented by 6 that embodies the recently validated fused pyrrolidine iminopyrimidinone scaffold. Employing structure-based design, truncation of the cyanophenyl group of 6 that binds in the S3 pocket of BACE1 followed by modification of the thienyl group in S1 was pursued. Optimization of the pyrimidine substituent that binds in the S2'-S2″ pocket of BACE1 remediated time-dependent CYP3A4 inhibition of earlier analogues in this series and imparted high BACE1 affinity. These efforts resulted in the discovery of difluorophenyl analogue 9 (MBi-4), which robustly lowered CSF and cortex Aβ40 in both rats and cynomolgus monkeys following a single oral dose. Compound 9 represents a unique molecular shape among BACE inhibitors reported to potently lower central Aβ in nonrodent preclinical species.

Drug induced liver injury (DILI) is a major reason for drug candidate attrition from development, denied commercialization, market withdrawal, and restricted prescribing of pharmaceuticals. The metabolic bioactivation of drugs to chemically reactive metabolites (CRM) contribute to liver-associated adverse drug reactions (ADR) in humans that often goes undetected in conventional animal toxicology studies. A challenge for pharmaceutical drug discovery has been reliably selecting drug candidates with a low liability of forming CRM and reduced DILI potential, at projected therapeutic doses, without falsely restricting the development of safe drugs. We have developed an in vivo rat liver transcriptional signature biomarker reflecting the cellular response to drug bioactivation. Measurement of transcriptional activation of integrated Nuclear factor erythroid 2-related factor 2 (NRF2)/Kelch-like ECH-associated protein 1 (Keap1) electrophilic stress, and Nuclear factor erythroid 2-related factor 1 (NRF1) proteasomal endoplasmic reticulum (ER) stress responses, is described for discerning estimated clinical doses of drugs with potential for bioactivation-mediated hepatotoxicity. The approach was established using well benchmarked CRM forming test agents from our company. This was subsequently tested using curated lists of commercial drugs and internal compounds, anchored in the clinical experience with human hepatotoxicity, while agnostic to mechanism. Based on results with 116 compounds in short-term rat studies, with consideration of the maximum recommended daily clinical dose, this CRM mechanism-based approach yielded 32% sensitivity and 92% specificity for discriminating safe from hepatotoxic drugs. The approach adds new information for guiding early candidate selection and informs structure activity relationships (SAR) thus enabling lead optimization and mechanistic problem solving. Additional refinement of the model is ongoing. Case examples are provided describing the strengths and limitations of the approach.

4-Substituted piperidine-derived trisubstituted ureas are reported as highly potent and selective inhibitors for sEH. The SAR outlines approaches to improve activity against sEH and reduce ion channel and CYP liability. With minimal off-target activity and a good PK profile, the benchmark 2d exhibited remarkable in vitro and ex vivo target engagement. The eutomer entA-2d also elicited vasodilation effect in rat mesenteric artery.

The cholesteryl ester transfer protein (CETP) inhibitor anacetrapib exhibits a long terminal half-life (t ½ ) in humans; however, the dispositional mechanisms that lead to this long t ½ are still being elucidated. As it is hypothesized that disposition into adipose tissue and binding to CETP might play a role, we sought to delineate the relative importance of these factors using a preclinical animal model. A multiple-dose pharmacokinetic study was conducted in C57BL6 wild-type (WT) lean, WT diet-induced obese (DIO), natural flanking region (NFR) CETP-transgenic lean, and NFR-DIO mice. Mice were dosed orally with 10 mg/kg anacetrapib daily for 42 days. Drug concentrations in blood, brown and white adipose tissue, liver, and brain were measured up to 35 weeks postdose. During dosing, a 3-to 9-fold accumulation in 72-hour postdose blood concentrations of anacetrapib was observed. Drug concentrations in white adipose tissue accumulated ∼20-to 40-fold, whereas 10-to 17-fold accumulation occurred in brown adipose and approximately 4-fold in liver. Brain levels were very low (<0.1 mM), and a trend of accumulation was not seen. The presence of CETP as well as adiposity seems to play a role in determining the blood concentrations of anacetrapib. The highest blood concentrations were observed in NFR DIO mice, whereas the lowest concentrations were seen in WT lean mice. In adipose and liver tissue, higher concentrations were seen in DIO mice, irrespective of the presence of CETP. This finding suggests that white adipose tissue serves as a potential depot and that disposition into adipose tissue governs the long-term kinetics of anacetrapib in vivo.