Soil salinity has become a serious threat to crop growth and productivity and has aggravated the gap between sustainable food supply and population growth. Application of plant growth-promoting rhizobacteria (PGPR) has emerged as a novel way of alleviating the harmful effects of salt stress and improving soil nutrients. The aim of this study was to study the effects of exposure cucumber seedlings at one co-inoculation of Bacillus licheniformis and B. subtilis, a mitigation of salt stress in cucumber seedlings. In this study, we isolated salt tolerant (NX-3 and NX-4) and growth-promoting (NX-48, NX-59, and NX-62) bacteria from the rhizosphere of cucumber. NX-3 and NX-59 were identified as B. licheniformis, and NX-4, NX-48 and NX-62 were identified as B. subtilis. Under salt stress, relative to non-inoculation, co-inoculation with B. licheniformis and B. subtilis increased stem diameter and plant fresh weight. Moreover, the concentration of substrate available phosphorus increased (except for NX4-59). The catalase and sucrase activities of NX4-62 were the highest. Meanwhile, NX3-62 and NX3-59 had the highest phosphorus content and NX3-59 had the highest urease activities. Comprehensive analysis indicated that NX4-62 and NX3-59 showed the best effect on promoting cucumber seedlings growth, activating substrate nutrients, and alleviate salt stress in seedlings of cucumber.