The conservation of threatened species must be underpinned by phylogeographic knowledge. This need is epitomized by the freshwater fish Carassius carassius, which is in decline across much of its European range. Restriction site-associated DNA sequencing (RADseq) is increasingly used for such applications; however, RADseq is expensive, and limitations on sample number must be weighed against the benefit of large numbers of markers. This trade-off has previously been examined using simulation studies; however, empirical comparisons between these markers, especially in a phylogeographic context, are lacking. Here, we compare the results from microsatellites and RADseq for the phylogeography of C. carassius to test whether it is more advantageous to genotype fewer markers (microsatellites) in many samples, or many markers (SNPs) in fewer samples. These data sets, along with data from the mitochondrial cytochrome b gene, agree on broad phylogeographic patterns, showing the existence of two previously unidentified C. carassius lineages in Europe: one found throughout northern and central-eastern European drainages and a second almost exclusively confined to the Danubian catchment. These lineages have been isolated for approximately 2.15 m years and should be considered separate conservation units. RADseq recovered finer population structure and stronger patterns of IBD than microsatellites, despite including only 17.6% of samples (38% of populations and 52% of samples per population). RADseq was also used along with approximate Bayesian computation to show that the postglacial colonization routes of C. carassius differ from the general patterns of freshwater fish in Europe, likely as a result of their distinctive ecology.
Juvenile Arctic charr, Salvelinus alpinus (L.), from two full sibling groups were studied concerning the possible existence of chemical cues with information about kinship. Each full sibling group was divided into two groups with the same number of specimens and placed in two separate aquaria. The division coincided with the start of exogenous feeding. Preference tests were performed about 7 and 10-13 months after the division. Due to the increasing size of experimental fish, two different sizes of apparatus were used. The first series ofexperiments was performed in a small Y-maze fluviarium and the second series in the large standard fluviarium. The momentary positions of one fish at a time in the test area were recorded by time-lapse photography with a 16-mm film camera and filtered flashlight (no transmittance < 670 nm). The fish were given a choice between two water qualities; thus the following comparisons were made: (i) unconditioned water Y. water scented by siblings from the same aquarium; (ii) unconditioned water Y. unfamiliar nonsiblings; (iii) siblings from the same aquarium v. unfamiliar non-siblings; (iv) siblings from a separate aquarium v. unfamiliar non-siblings; ~(v) siblings from the same aquarium v. siblings from a separate aquarium. The test fishes preferred water scented by siblings over non-siblings, even though the siblings wcrc taken from a separate aquarium. Nevertheless, they were attracted to water scented by unfamiliar non-siblings in preference to unconditioned water. N o preference was shown between chemical cues from siblings taken from the same and a separate aquarium.
Searching for the bull's eye: agents and targets of selection vary among geographically disparate cyanogenesis clines in white clover (Trifolium repens L.)
NJ Kooyers 1 and KM OlsenThe recurrent evolution of adaptive clines within a species can be used to elucidate the selective factors and genetic responses that underlie adaptation. White clover is polymorphic for cyanogenesis (HCN release with tissue damage), and climateassociated cyanogenesis clines have evolved throughout the native and introduced species range. This polymorphism arises through two independently segregating Mendelian polymorphisms for the presence/absence of two required components: cyanogenic glucosides and their hydrolyzing enzyme linamarase. Cyanogenesis is commonly thought to function in herbivore defense; however, the individual cyanogenic components may also serve other physiological functions. To test whether cyanogenesis clines have evolved in response to the same selective pressures acting on the same genetic targets, we examined cyanogenesis cline shape and its environmental correlates in three world regions: southern New Zealand, the central United States and the US Pacific Northwest. For some regional comparisons, cline shapes are remarkably similar despite large differences in the spatial scales over which clines occur (40-1600 km). However, we also find evidence for major differences in both the agents and targets of selection among the sampled clines. Variation in cyanogenesis frequency is best predicted using a combination of minimum winter temperature and aridity variables. Together, our results provide evidence that recurrent adaptive clines do not necessarily reflect shared adaptive processes.
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