Insulin receptor substrate-2 (IRS-2) plays critical role in the regulation of various metabolic processes by insulin and IGF-1. The defects in its expression and/or function are linked to diseases like polycystic ovary syndrome (PCOS), insulin resistance and cancer. To predict the transcription factors (TFs) responsible for the regulation of human IRS-2 gene expression, the transcription factor binding sites (TFBS) and the corresponding TFs were investigated by analysis of IRS-2 promoter sequence using MatInspector Genomatix software (Cartharius et al., 2005 [1]). The ibid data is part of author׳s publication (Anjali et al., 2015 [2]) that explains Follicle stimulating hormone (FSH) mediated IRS-2 promoter activation in human granulosa cells and its importance in the pathophysiology of PCOS. Further analysis was carried out for binary interactions of TF regulatory genes in IRS-2 network using Cytoscape software tool and R-code. In this manuscript, we describe the methodology used for the identification of TFBSs in human IRS-2 promoter region and provide details on experimental procedures, analysis method, validation of data and also the raw files. The purpose of this article is to provide the data on all TFBSs in the promoter region of human IRS-2 gene as it has the potential for prediction of the regulation of IRS-2 gene in normal or diseased cells from patients with metabolic disorders and cancer.
Background: Polycystic ovary syndrome (PCOS) is a growing morbidity in young women globally. This disease has an association with several exogenous factors like irregularity of menses, hirsutism and obesity. Very few standardized self-assessment tools based on easily observable factors are available for use in the Indian population, which can help them to assess their PCOS risk accurately.Methods: Undergraduate women of the age group 18-22 years enrolled in a university campus participated in the survey questionnaire. Nineteen questions with binary answers as “yes” or “no” were used for self-assessment test. Each “yes” was scored as one mark, and each “no” scored as zero, leading to the maximum score of 19. Scores of the women with irregular menses (test group) were compared to those of regular menses (control group). Welch’s corrected t-test was used to calculate the significance at 5% between the groups. The clinical assessment confirmed the presence or absence of PCOS condition.Results: One thousand and fifty-four women participated in the study. The study showed that 262 (24.8%) of young women reported irregular menstrual cycle. The average total score of the control group was 3.07±2.35, whereas that of the women with irregular menses was 5.93±2.86. 21 out of 28 participants, who scored high, were diagnosed with PCOS, on clinical assessment by Rotterdam criteria.Conclusions: The self-assessment test can assess the risk of PCOS. This test has 75% sensitivity and accuracy in predicting the presence of PCOS.
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