Slender leaf (Crotalaria spp) is among the indigenous and underutilized vegetables in Kenya whose production is limited to the Western and Coastal regions of the country. For a long time, this crop has been neglected in terms of research and genetic improvement. There is therefore scanty information on its morphological diversity and agronomic performance, hence the need for this study. Field experiments were carried out for two seasons in October to December 2018 and March to May 2019. The experiments were laid out in Randomized Complete Block Design with 29 accessions and replicated three times. Both qualitative and quantitative data were recorded from the accessions based on the Crotalaria descriptors. Quantitative data were subjected to analysis of variance using XLSTAT Version 2019, and accession means were separated using Student’s Newman Keuls test at 95% level of confidence. Both qualitative and quantitative data were subjected to multivariate cluster analysis, and a dendrogram was constructed using the unweighted pair-group method with arithmetic average. The principal component analysis was conducted to obtain information on the importance of the characters. Significant variation in agro-morphological traits was found within and between the two species. Cluster analysis grouped the accessions into seven major classes with a between-classes diversity of 75.13% and a within-classes diversity of 24.87%. This study sets the basis for genetic improvement of slender leaf in Kenya since the observed diversity can be exploited in selection for intraspecific and interspecific hybridization.

For ages, plant breeders have relied on the genetic variability that results from sexually crossing plants within the same species. However, the variability that exists within species populations is inadequate, hence the need to exploit desirable traits of interest in distantly related or even unrelated plants through hybridization techniques. Hybridization can be categorized into two; sexual and somatic. Sexual hybridization, also referred to as wide or distant hybridization involves combining two genomes from different parental taxa through pollination, either naturally or by induction. Somatic hybridization involves the fusion of somatic cells instead of gametes, which highly depends on the ability to obtain viable protoplasts and eventually differentiate them to whole plants in vitro. The impacts of hybrids can either be positive or negative. Among the positive attributes of hybrids that have been exploited is heterosis, which results either from dominance, over-dominance or epistasis. Negative ones include sterility, arrested growth of the pollen tube and embryo abortion. To overcome these problems, chromosome doubling, the use of hormones such as 2, 4-Dichlorophenoxyacetic acid (2, 4-D) and embryo rescue have been employed to overcome sterility, arrested growth of pollen tubes and embryo abortion respectively. After the development of hybrids, different hybrid identification techniques have been used to test them such as the use of molecular and morphological markers, cytogenetic analysis and fluorescent in situ hybridization. The use of hybridization techniques in plant improvement remains a vital tool to cross species barriers and utilization of important attributes in unrelated crop plants which could not have been achieved through conventional techniques of plant breeding.

Background Diversification of global food systems through exploration of traditional varieties and wild edible plant species is a focal mitigation strategy for food security worldwide. The present study determined the phenomic diversity of locally available, affordable and climate-resilient cultivated and wild Crotalaria species for breeding purposes. Methods Seed samples were collected from different administrative counties in Kenya spanning different climatic zones. Other seeds were provided by the Genetic Resources Research Institute of Kenya. A randomized complete block design with three replications was used for agro-morphological evaluation of the 83 accessions used in this study. Data on quantitative and qualitative traits was collected. Cluster analysis on R and R-studio was used to generate a dendrogram by the Euclidian genetic distance and dissimilarity indices while the non-metric multidimensional scaling (NMDS) method was used to determine the spatial interrelationship between the accessions. The Pearson’s correlation coefficients were used to determine the relationships between qualitative and quantitative traits while the principal component analysis was used to discriminate the accessions. Results Three edible species (C. brevidens Benth., C. ochroleuca G.Don, C. trichotoma Bojer.) were found to be cultivated by Kenyan farmers and a significant variation (p < 0.0001) for all parameters under study was recorded. Agglomerative hierarchical clustering grouped the accessions into 8 major clusters. The NMDS ordination formed 15 and 6 groups based on counties and regions respectively. Conclusions This study forms the basis for exploring novel breeding strategies among cultivated species, between wild and cultivated Crotalaria species as well as determining molecular markers linked to phenomic traits.

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Crotalaria is a plant genus that is found all over the world, with over 700 species of herbs and shrubs. The species are potential alternative food and industrial crops due to their adaptability to different environments. Currently, information on the genetic diversity and population structure of these species is scanty. Genotyping-by-sequencing (GBS) is a cost-effective high-throughput technique in diversity evaluation of plant species that have not been fully sequenced. In the current study, de novo GBS was used to characterize 80 Crotalaria accessions from five geographical regions in Kenya. A total of 9820 single nucleotide polymorphism (SNP) markers were obtained after thinning and filtering, which were then used for the analysis of genetic diversity and population structure in Crotalaria. The proportion of SNPs with a minor allele frequency (maf) > = 0.05 was 45.08%, while the Guanine-Cytosine (GC) content was 0.45, from an average sequence depth of 455,909 reads per base. The transition vs transversion ratio was 1.81 and Heterozygosity (He) ranged between 0.01–0.07 in all the sites and 0.04 to 0.52 in the segregating sites. The mean Tajima’s D value for the population was -0.094, suggesting an excess of rare alleles. The fixation index (Fst) between the different populations based on the Wright Fst (1943) ranged from 0.0119 to 0.066 for the Eastern-Western and Nairobi-Western populations. Model based techniques of population structure analysis including structure, k-means and cross-entropy depicted eight clusters in the study accessions. Non-model based techniques especially DAPC depicted poor population stratification. Correspondence Analysis (CA), Principal coordinate analyses (PCoA) and phylogenetic analysis identified a moderate level of population stratification. Results from this study will help conservationists and breeders understand the genetic diversity of Crotalaria. The study also provides valuable information for genetic improvement of domesticated species.

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Background: Diversification of global food systems through exploration of traditional varieties and wild edible plant species is a focal mitigation strategy for food security worldwide. The present study determined the phenomic diversity of locally available, affordable and climate-resilient cultivated and wild Crotalaria species for breeding purposes. Seed samples were collected from different administrative counties in Kenya spanning different climatic zones. Other seeds were provided by the Genetic Resources Research Institute of Kenya. A randomized complete block design with three replications was used for agro-morphological evaluation of the 83 accessions used in this study. Data on quantitative and qualitative traits was collected. Cluster analysis on R and R-studio was used to generate a dendrogram by the Euclidian genetic distance and dissimilarity indices while the non-metric multidimensional scaling (NMDS) method was used to determine the spatial interrelationship between the accessions. The Pearson’s correlation coefficients were used to determine the relationships between qualitative and quantitative traits while the principal component analysis was used to discriminate the accessions. Results: Three edible species (C. brevidens Benth., C. ochroleuca G.Don, C. trichotoma Bojer.) were found to be cultivated by Kenyan farmers and a significant variation (p<0.0001) for all parameters under study was recorded. Agglomerative hierarchical clustering grouped the accessions into 8 major clusters. The NMDS ordination formed 15 and 6 groups based on counties and regions respectively. Conclusions: This study forms the basis for exploring novel breeding among cultivated species, between wild and cultivated Crotalaria species as well as determining molecular markers linked to phenomic traits.