Eurasian otter populations strongly declined and partially disappeared due to global and local causes (habitat destruction, water pollution, human persecution) in parts of their continental range. Conservation strategies, based on reintroduction projects or restoration of dispersal corridors, should rely on sound knowledge of the historical or recent consequences of population genetic structuring. Here we present the results of a survey performed on 616 samples, collected from 19 European countries, genotyped at the mtDNA control-region and 11 autosomal microsatellites. The mtDNA variability was low (nucleotide diversity = 0.0014; average number of pairwise differences = 2.25), suggesting that extant otter mtDNA lineages originated recently. A star-shaped mtDNA network did not allow outlining any phylogeographic inference. Microsatellites were only moderately variable (H o = 0.50; H e = 0.58, on average across populations), the average allele number was low (observed A o = 4.9, range 2.5-6.8; effective A e = 2.8; range 1.6-3.7), suggesting small historical effective population size. Extant otters likely originated from the expansion of a single refugial population. Bayesian clustering and landscape genetic analyses however indicate that local populations are genetically differentiated, perhaps as consequence of post-glacial demographic fluctuations and recent isolation. These results delineate a framework that should be used for implementing conservation programs in Europe, particularly if they are based on the reintroduction of wild or captive-reproduced otters.
Conservation and management actions are often highly dependent on accurate estimations of population sizes. However, these estimates are difficult to obtain for elusive and rare species. We compared two census methods for Eurasian otter: snow tracking and noninvasive genetic census based on the genotyping of faecal samples. With the noninvasive genetic census we detected the presence of almost twice as many otters as with snow tracking (23 and 10-15, respectively), and mark-recapture estimates based on the genetic census indicated that the real number of otters could be even higher. Our results indicate that snow tracking tends to underestimate the number of individuals and also that it is more susceptible to subjective assessment. We compared the strengths and weaknesses of the two methods.
We performed a demo-genetic population viability analysis on a recovering population of otters Lutra lutra in Central Sweden, using data on population size, survival and genetic data from microsatellites. Population data were obtained from genotyping faeces. At present, the size and genetic variability of the population is increasing. We found that survival to first reproduction was the most crucial demographic parameter, and that even slight changes downward in this parameter, might lead to a declining population trajectory. Human factors that can affect mortality are traffic, fishing equipment and traps, and we argue that efforts to minimize road kills by means of safe passages as well as careful fishing efforts in streams and lakes would reduce the risk of extinction. In general, even though the population is now growing and has no inbreeding problem, its small abundance could make it vulnerable to chance events and environmental perturbations.
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