We report improved whole-genome shotgun sequences for the genomes of indica and japonica rice, both with multimegabase contiguity, or almost 1,000-fold improvement over the drafts of 2002. Tested against a nonredundant collection of 19,079 full-length cDNAs, 97.7% of the genes are aligned, without fragmentation, to the mapped super-scaffolds of one or the other genome. We introduce a gene identification procedure for plants that does not rely on similarity to known genes to remove erroneous predictions resulting from transposable elements. Using the available EST data to adjust for residual errors in the predictions, the estimated gene count is at least 38,000–40,000. Only 2%–3% of the genes are unique to any one subspecies, comparable to the amount of sequence that might still be missing. Despite this lack of variation in gene content, there is enormous variation in the intergenic regions. At least a quarter of the two sequences could not be aligned, and where they could be aligned, single nucleotide polymorphism (SNP) rates varied from as little as 3.0 SNP/kb in the coding regions to 27.6 SNP/kb in the transposable elements. A more inclusive new approach for analyzing duplication history is introduced here. It reveals an ancient whole-genome duplication, a recent segmental duplication on Chromosomes 11 and 12, and massive ongoing individual gene duplications. We find 18 distinct pairs of duplicated segments that cover 65.7% of the genome; 17 of these pairs date back to a common time before the divergence of the grasses. More important, ongoing individual gene duplications provide a never-ending source of raw material for gene genesis and are major contributors to the differences between members of the grass family.

Obtaining fully functional cell types is a major challenge for drug discovery and regenerative medicine. Currently, a fundamental solution to this key problem is still lacking. Here, we show that functional human induced hepatocytes (hiHeps) can be generated from fibroblasts by overexpressing the hepatic fate conversion factors HNF1A, HNF4A, and HNF6 along with the maturation factors ATF5, PROX1, and CEBPA. hiHeps express a spectrum of phase I and II drug-metabolizing enzymes and phase III drug transporters. Importantly, the metabolic activities of CYP3A4, CYP1A2, CYP2B6, CYP2C9, and CYP2C19 are comparable between hiHeps and freshly isolated primary human hepatocytes. Transplanted hiHeps repopulate up to 30% of the livers of Tet-uPA/Rag2(-/-)/γc(-/-) mice and secrete more than 300 μg/ml human ALBUMIN in vivo. Our data demonstrate that human hepatocytes with drug metabolic function can be generated by lineage reprogramming, thus providing a cell resource for pharmaceutical applications.

The hydrogenation of acetylene and ethylene was studied on Au/Al2O3 catalyst. Acetylene and hydrogen reacted readily to produce ethylene, but not to ethane on the catalyst in the temperature range between 313 and 523 K. The hydrogenation of ethylene on the catalyst occurred only at much higher temperatures over 573 K. The activity of the selective hydrogenation of acetylene over Au/Al2O3 catalyst depends on the size of ultrafine gold particles of Au/Al2O3 catalyst, which showed a maximum at about 3.0 nm in diameter.

No abstract

Nonstoichiometric Fe-Ti spinel

In order to facilitate the removal of elemental mercury (Hg(0)) from coal-fired flue gas, catalytic oxidation of Hg(0) with manganese oxides supported on inert alumina (alpha-Al2O3) was investigated at lower temperatures (373-473 K). To improve the catalytic activity and the sulfur-tolerance of the catalysts at lower temperatures, several metal elements were employed as dopants to modify the catalyst of Mn/alpha-Al2O3. The best performance among the tested elements was achieved with molybdenum (Mo) as the dopant in the catalysts. It can work even better than the noble metal catalyst Pd/alpha-Al2O3. Additionally, the Mo doped catalyst displayed excellent sulfur-tolerance performance at lower temperatures, and the catalytic oxidation efficiency for Mo(0.03)-Mn/alpha-Al2O3 was over 95% in the presence of 500 ppm SO2 versus only about 48% for the unmodified catalyst. The apparent catalytic reaction rate constant increased by approximately 5.5 times at 423 K. In addition, the possible mechanisms involved in Hg(0) oxidation and the reaction with the Mo modified catalyst have been discussed.

MnO x /Al 2 O 3 catalysts (i.e., impregnating manganese oxide on alumina) were employed to remove elemental mercury (Hg 0 ) from flue gas. MnO x /Al 2 O 3 was found to have significant adsorption performance on capturing Hg 0 in the absence of hydrogen chloride (HCl), and its favorable adsorption temperature was about 600 K. However, the catalytic oxidation of Hg 0 became dominant when HCl or chlorine (Cl 2 ) was present in flue gas, and the removal efficiency of Hg 0 was up to 90% with 20 ppm of HCl or 2 ppm of Cl 2 . In addition, the catalysts with adsorbed mercury could be chemically regenerated by rinsing with HCl gas to strip off the adsorbed mercury in the form of HgCl 2 . Sulfur dioxide displayed inhibition to the adsorption of Hg 0 on the catalysts, but the inhibition was less to the catalytic oxidation of Hg 0 , especially in the presence of Cl 2 . The analysis results of XPS and pyrolysis-AAS indicated that the adsorbed mercury was mainly in the forms of mercuric oxide (HgO) and the weakly bonded speciation, and the ratio of them varied with the adsorption amount and manganese content on catalysts. The multifunctional performances of MnO x /Al 2 O 3 on the removal of Hg 0 appeared to be promising in the industrial applications.

The maintenance of terminally differentiated cells, especially hepatocytes, in vitro has proven challenging. Here we demonstrated the long-term in vitro maintenance of primary human hepatocytes (PHHs) by modulating cell signaling pathways with a combination of five chemicals (5C). 5C-cultured PHHs showed global gene expression profiles and hepatocyte-specific functions resembling those of freshly isolated counterparts. Furthermore, these cells efficiently recapitulated the entire course of hepatitis B virus (HBV) infection over 4 weeks with the production of infectious viral particles and formation of HBV covalently closed circular DNA. Our study demonstrates that, with a chemical approach, functional maintenance of PHHs supports long-term HBV infection in vitro, providing an efficient platform for investigating HBV cell biology and antiviral drug screening.