A new semiempirical potential, based on density functional calculations and a bond-order Morse-like potential, is developed to simulate the adsorption behavior of thiolate molecules on non-planar gold surfaces, including relaxing effects, in a more realistic way. The potential functions include as variables the metal-molecule separation, vibrational frequencies, bending and torsion angles between several pairs of atom types and the coordination number of both the metal (Au) and thiolate groups. The potential was parameterized based on a set of density functional calculations of molecular adsorption in several surface sites (i.e. hollow, bridge, top, on-top Au adatom and the novel staple motif) for different crystalline facets, i.e. Au(111) and (100). Langevin dynamics simulations have been performed to study the capping effects of alkanethiolates molecules on Au nanoparticles in the range 1-4 nm. The simulation results reveal an enhancement of the coverage degree whilst the nanoparticles diameter decreases. A high surface disorder due to the strong S-Au bond was found, in very good agreement with very recent experimental findings [M. M. Mariscal, J. A. Olmos-Asar, C. Gutierrez-Wing, A. Mayoral and M. J. Yacaman, Phys. Chem. Chem. Phys., 2010, 12, 11785].
In the present work new findings on the structure of the S-Au interface are presented. Theoretical calculations using a new semiempirical potential, based on density functional theory and a bond-order Morse potential, are employed to simulate the adsorption process in a more realistic way. The simulation results reveal the formation of gold adatoms on the nanoparticle surface and high surface disorder due to the strong S-Au bond. Experimental data were acquired by aberration (Cs) corrected scanning transmission electron microscopy (STEM) using a high angle annular dark field detector (HAADF) that showed a great similarity with the theory predicted.
In this work we present an atomistic simulation study analyzing the effect of ligand molecules on the morphology and crystalline structure of monolayer protected gold nanoparticles (NPs). In particular, we focused on Au NPs covered with alkyl thiolates (-SR), which form a strong covalent bond with the Au surface, and alkyl amines (-NH2R), which physisorb onto gold. The atomic interactions between gold and the head groups of ligand molecules were represented by means of a recently developed bond-order potential [Olmos-Asar et al., Phys. Chem. Chem. Phys., 2011, 13, 6500]. We found in the case of strong passivants (i.e. -SR) significant surface damage and/or amorphous-like structures, whereas soft passivants (-NH2R) do not produce almost any distortion in the crystalline structure of the metallic NPs. The enriched coverage degree related to flat surfaces is also discussed. We have also demonstrated that the new semi-empirical potential can reproduce low-coordinated adsorption sites, unlike usual pairwise classical potentials. In general, our simulations provide a direct observation of the structure of ligand protected gold nanoparticles.
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