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Fusarium oxysporum f. sp. cucumerinum is a destructive pathogen on cucumber (Cucumis sativus L.) seedlings and the causal organism of crown and root rot of cucumber plants. An isolate of B579, which was identified as Bacillus subtilis by 16S rDNA sequences analysis, was selected from 158 bacteria isolates as the best antagonist against F. oxysporum by dual plate assay. The production of chitinase, b-1, 3-glucanase, siderophores, indole-3-acetic acid (IAA), hydrogen cyanide (HCN), and phosphate solubilization, by B579 were screened with the selected medium by in vitro tests. The cell-free culture filtrate of B579, with a concentration of 20% (v/v), could result in the vacuolation, swelling and lysis of hyphae. Besides, it could blacken, shrunk and hindered the germination of conidia of F. oxysporum at the concentration of C80% (v/v). When applied as inoculants, B579 (10 8 c.f.u. ml -1 ) was able to reduce disease incidence by 73.60%, and promote seedling growth in pot trial studies. The activities of plant defenserelated enzyme, peroxidase (POX), polyphenol oxidase (PPO) and phenylalanine ammonia-lyase (PAL) were significantly increased in plants treated with B579. Interestingly, a higher content of IAA, an important plant growth regulator, was detected in B579 treated plants. Furthermore, seed-soaking with B579 exhibited a better biological control effect (Biocontrol effect 73.60%) and plant growth promoting ability (Vigor Index 4,177.53) than root-irrigation (50.88% and 3,575.77, respectively), suggesting the potential use of B579 as a seed-coating agent.

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3-Ketosteroid Δ 1 -dehydrogenase (KsdD) is the key enzyme responsible for Δ 1 -dehydrogenation, which is one of the most valuable reactions for steroid catabolism. Arthrobacter simplex has been widely used in the industry due to its superior bioconversion efficiency, but KsdD information is not yet fully clear. Here, five KsdD homologues were identified in A. simplex CGMCC 14539. Bioinformatic analysis indicated their distinct properties and structures. Each KsdD was functionally confirmed by transcriptional response, overexpression, and heterologous expression. The substantial difference in substrate profiles might be related to the enzyme loop structure. Two promising enzymes (KsdD3 and KsdD5) were purified and characterized, exhibiting strong organic solvent tolerance and clear preference for 4-ene-3-oxosteroids. KsdD5 seemed to be more versatile due to good activity on substrates with or without a substituent at C11 and high optimal temperature and also possessed unique residues. It is the first time that KsdDs have been comprehensively disclosed in the A. simplex industrial strain.

During steroid bioconversion, organic solvents are widely used for facilitating hydrophobic substrate dissolution in industry. Thus, strains that tolerate organic solvents are highly desirable. IrrE, a global transcriptional factor, was introduced into Arthrobacter simplex with Δ-dehydrogenation ability. The results evidenced that IrrE did not affect cell biological traits and biotransformation performance under non-stress conditions. However, the recombinant strain achieved a productivity higher than that of the control strain in systems containing more ethanol and substrate, which coincided with cell viability under ethanol stress, the major stress factor during biotransformation. It also demonstrated that IrrE caused genome-wide transcriptional perturbation, and several defense proteins or systems were linked with higher organic solvent tolerance. IrrE simultaneously enhanced cell resistance to various stresses, and its horizontal impacts showed strain and stress dependence. In conclusion, the introduction of exogenous global regulators is an efficient approach to enhance organic solvent tolerance in steroid-transforming strains, resulting in higher productivity.

Cyclodextrins (CDs) can improve productivity in the biotransformation of steroids by increasing conversion rate, conversion ratio, or substrate concentration. However, little is known of the proportion of products formed by multi-catabolic enzymes, e.g., via sterol side chain cleavage. Using three strains with different androst-1,4-diene-3,17-dione (ADD) to androst-4-ene-3,17-dione (AD) ratios, Mycobacterium neoaurum TCCC 11028 (MNR), M. neoaurum TCCC 11028 M1 (MNR M1), and M. neoaurum TCCC 11028 M3 (MNR M3), we found that hydroxypropyl-β-cyclodextrin (HP-β-CD) can appreciably increase the ratio of ADD to AD, the reaction rate, and the molar conversion. In the presence of HP-β-CD, conversion of 0.5 g/L of phytosterol (PS) was 2.4, 2.4, and 2.3 times higher in the MNR, MNR M1, and MNR M3 systems, respectively, than in the controls. The ADD proportion increased by 38.4, 61.5, and 5.9 % compared with the control experiment, which resulted in a strong shift in the ADD/AD ratio in the ADD direction. Our results imply that the three PS-biotransforming strains cause efficient side chain degradation of PS, and the increased conversion of PS when using HP-β-CD may be associated with the higher PS concentration in each case. A similar solubilizing effect may not induce a prominent influence on the ADD/AD ratio. However, the different activities of the Δ¹-dehydrogenase of PS-biotransforming strains result in different incremental percentage yields of ADD and ADD/AD ratio in the presence of HP-β-CD.

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