The word “predator” may conjure images of leopards killing and eating impala on the African savannah or of great white sharks attacking elephant seals off the coast of California. But microorganisms are also predators, including bacteria that kill and eat other bacteria.
Background and aims The Serengeti grassland is characterized by antiparallel gradients of soil phosphorus (P) and precipitation. We hypothesized that grasses associate with arbuscular mycorrhizal (AM) fungi to ameliorate water stress and improve nutrient acquisition; and, that geographic patterns in AM fungal abundance relate to nutrient and water limitation of host plants.Methods We conducted a factorial experiment to uncouple the interacting effects of soil type, P, and water availability on AM fungal abundance. Maize was grown in pots of soil collected from three locations across the natural gradients. Full factorial treatments of +/− P fertilization and high/low water were administered to all three soils. Results Abundance of AM hyphae in soil was reduced by fertilization in high-P soil and increased with fertilization in low-P soil. Phosphorus uptake efficiency of mycorrhizas was greatest in low-P soil. Water-limited plants grown in arid region soil allocated relatively more biomass to AM fungi. Conclusions The formation of AM fungi in each soil was most strongly linked to the most limiting belowground resource. Interactions among soil properties, water availability and variation in the community composition of AM fungi are likely to influence the abundance and function of AM symbioses the Serengeti.
Study of life history strategies may help predict the performance of microorganisms in nature by organizing the complexity of microbial communities into groups of organisms with similar strategies. Here, we tested the extent that one common application of life history theory, the copiotroph-oligotroph framework, could predict the relative population growth rate of bacterial taxa in soils from four different ecosystems. We measured the change of in situ relative growth rate to added glucose and ammonium using both 18O–H2O and 13C quantitative stable isotope probing to test whether bacterial taxa sorted into copiotrophic and oligotrophic groups. We saw considerable overlap in nutrient responses across most bacteria regardless of phyla, with many taxa growing slowly and few taxa that grew quickly. To define plausible life history boundaries based on in situ relative growth rates, we applied Gaussian mixture models to organisms’ joint 18O–13C signatures and found that across experimental replicates, few taxa could consistently be assigned as copiotrophs, despite their potential for fast growth. When life history classifications were assigned based on average relative growth rate at varying taxonomic levels, finer resolutions (e.g., genus level) were significantly more effective in capturing changes in nutrient response than broad taxonomic resolution (e.g., phylum level). Our results demonstrate the difficulty in generalizing bacterial life history strategies to broad lineages, and even to single organisms across a range of soils and experimental conditions. We conclude that there is a continued need for the direct measurement of microbial communities in soil to advance ecologically realistic frameworks.
Abstract1. It is known that tropical grasslands such as Serengeti host large populations of arbuscular mycorrhizal (AM) fungi and that they respond to abiotic and biotic factors.It is also known that AM symbioses are important for the uptake of essential plant nutrients, which, in turn, influences the biomass and nutritional quality of herbivores and their predators. The purpose of this study was to investigate the influence of AM symbioses on the biomass of different trophic levels of an ecosystem.2. To do this, we first measured the neutral lipid fatty acid biomarker 16:1ω5 to estimate the biomass of AM fungi in a long-term grazing exclusion experiment. Then, we used model selection of Bayesian linear regressions to infer the primary factors that influence AM fungal biomass. Using model selection of different combinations of soil characteristics, we selected the best model using the leave-one-out crossvalidation information criterion. Finally, we used the Madingley model to simulate the influence of AM fungi on higher trophic levels. We combined spatially explicit information about soil phosphorus and AM fungal biomass to explore the emergent patterns of the Serengeti resulting from AM symbioses.3. Our Bayesian analysis indicated that total soil phosphorus was the strongest predictor of AM fungal biomass, and there were significant interactions with grazing.Arbuscular mycorrhizal fungal biomass is lowest in soil where phosphorus is limited and increases with increasing phosphorus concentration. Biomass was also significantly higher in plots that were not grazed. The Madingley model indicated that nutritional benefits of AM symbioses maintain a substantial proportion of the biomass across all trophic levels. 4. Synthesis. Our analysis shows that inputs of phosphorus through arbuscular mycorrhizal symbioses substantially increase the ability of plants to grow and maintain nutritional quality, cascading through the biomass of consumers and predators in the ecosystem. Although they account for less than 1% of the total modelled biomass, the predicted nutritional benefit provided by arbuscular mycorrhizal fungi increased the biomass of macro-organisms in the Serengeti by 48%. When considering the management of biodiversity, future ecosystem models should account for the influence of arbuscular mycorrhizal fungi on all trophic levels.
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