To advance models of multimodal context, we introduce a simple yet powerful neural architecture for data that combines vision and natural language. The "Bounding Boxes in Text Transformer" (B2T2) also leverages referential information binding words to portions of the image in a single unified architecture. B2T2 is highly effective on the Visual Commonsense Reasoning benchmark 1 , achieving a new state-of-the-art with a 25% relative reduction in error rate compared to published baselines and obtaining the best performance to date on the public leaderboard (as of May 22, 2019). A detailed ablation analysis shows that the early integration of the visual features into the text analysis is key to the effectiveness of the new architecture. A reference implementation of our models is provided 2 .
General purpose relation extractors, which can model arbitrary relations, are a core aspiration in information extraction. Efforts have been made to build general purpose extractors that represent relations with their surface forms, or which jointly embed surface forms with relations from an existing knowledge graph. However, both of these approaches are limited in their ability to generalize. In this paper, we build on extensions of Harris' distributional hypothesis to relations, as well as recent advances in learning text representations (specifically, BERT), to build task agnostic relation representations solely from entity-linked text. We show that these representations significantly outperform previous work on exemplar based relation extraction (FewRel) even without using any of that task's training data. We also show that models initialized with our task agnostic representations, and then tuned on supervised relation extraction datasets, significantly outperform the previous methods on Se-mEval 2010 Task 8, KBP37, and TACRED. * Work done as part of the Google AI residency.
Sequence-to-sequence models with attention have been successful for a variety of NLP problems, but their speed does not scale well for tasks with long source sequences such as document summarization. We propose a novel coarse-to-fine attention model that hierarchically reads a document, using coarse attention to select top-level chunks of text and fine attention to read the words of the chosen chunks. While the computation for training standard attention models scales linearly with source sequence length, our method scales with the number of top-level chunks and can handle much longer sequences. Empirically, we find that while coarse-tofine attention models lag behind state-ofthe-art baselines, our method achieves the desired behavior of sparsely attending to subsets of the document for generation.
General purpose relation extractors, which can model arbitrary relations, are a core aspiration in information extraction. Efforts have been made to build general purpose extractors that represent relations with their surface forms, or which jointly embed surface forms with relations from an existing knowledge graph. However, both of these approaches are limited in their ability to generalize. In this paper, we build on extensions of Harris' distributional hypothesis to relations, as well as recent advances in learning text representations (specifically, BERT), to build task agnostic relation representations solely from entity-linked text. We show that these representations significantly outperform previous work on exemplar based relation extraction (FewRel) even without using any of that task's training data. We also show that models initialized with our task agnostic representations, and then tuned on supervised relation extraction datasets, significantly outperform the previous methods on Se-mEval 2010 Task 8, KBP37, and TACRED.
BackgroundMass spectrometry (MS) has evolved to become the primary high throughput tool for proteomics based biomarker discovery. Until now, multiple challenges in protein MS data analysis remain: large-scale and complex data set management; MS peak identification, indexing; and high dimensional peak differential analysis with the concurrent statistical tests based false discovery rate (FDR). “Turnkey” solutions are needed for biomarker investigations to rapidly process MS data sets to identify statistically significant peaks for subsequent validation.FindingsHere we present an efficient and effective solution, which provides experimental biologists easy access to “cloud” computing capabilities to analyze MS data. The web portal can be accessed at http://transmed.stanford.edu/ssa/.ConclusionsPresented web application supplies large scale MS data online uploading and analysis with a simple user interface. This bioinformatic tool will facilitate the discovery of the potential protein biomarkers using MS.
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