Numerical simulation of plant growth has been facing a bottleneck due to the cumbersome computation implied by the complex plant topological structure. In this article, the authors present a new mathematical model for plant growth, GreenLab, overcoming these difficulties. GreenLab is based on a powerful factorization of the plant structure. Fast simulation algorithms are derived for deterministic and stochastic trees. The computation time no longer depends on the number of organs and grows at most quadratically with the age of the plant. This factorization finds applications to build trees very efficiently, in the context of geometric models, and to compute biomass production and distribution, in the context of functional structural models.
Plants have a high phenotypic plasticity in response to light. We investigated changes in plant architecture in response to decreased incident light levels in Arabidopsis thaliana (L.) Heynh, focusing on organogenesis and morphogenesis, and on consequences for the efficiency of light interception of the rosette. A. thaliana ecotype Columbia plants were grown under various levels of incident photosynthetically active radiation (PAR), with blue light (BL) intensity proportional to incident PAR intensity and with a high and stable red to far-red light ratio. We estimated the PAR absorbed by the plant, using data from precise characterisation of the light environment and 3-dimensional simulations of virtual plants generated with AMAPsim software. Decreases in incident PAR modified rosette architecture; leaf area decreased, leaf blades tended to be more circular and petioles were longer and thinner. However, the efficiency of light interception by the rosette was slightly higher in plants subjected to lower PAR intensities, despite the reduction in leaf area. Decreased incident PAR delayed leaf initiation and slowed down relative leaf expansion rate, but increased the duration of leaf expansion. The leaf initiation rate and the relative expansion rate during the first third of leaf development were related to the amount of PAR absorbed. The duration of leaf expansion was related to PAR intensity. The relationships identified could be used to analyse the phenotypic plasticity of various genotypes of Arabidopsis. Overall, decreases in incident PAR result in an increase in the efficiency of light interception.
Summary
Where large browsers are abundant, the survival of trees depends on their ability to deploy defences, either chemical or structural. Structural defences include the arrangement of dense and intricate architecture, termed ‘cage’ architecture. Previous studies showed that trees developing in herbivore‐rich environments tend to have more cage architecture but its precise effect on mammalian herbivores remains unknown.
In this paper, we experimentally test how cage architecture affects the bite rate of goats, a generalist mammalian herbivore.
We selected 11 palatable tree species with contrasting architectures. We described their caginess using an index combining spinescence and woodiness of their stems. Finally, we evaluated how the caginess of trees slows down herbivores when feeding on the inner leaves in tree crowns.
We observed that the bite rate of goats on inner leaves of the cagiest trees was so severely reduced that they could not satisfy their daily nutritional requirements. We discuss how this could affect the preference of wild herbivores for less cagy trees, especially at the end of the dry season.
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