The analysis of individuals with ciliary chondrodysplasias can shed light on sensitive mechanisms controlling ciliogenesis and cell signalling that are essential to embryonic development and survival. Here we identify TCTEX1D2 mutations causing Jeune asphyxiating thoracic dystrophy with partially penetrant inheritance. Loss of TCTEX1D2 impairs retrograde intraflagellar transport (IFT) in humans and the protist Chlamydomonas, accompanied by destabilization of the retrograde IFT dynein motor. We thus define TCTEX1D2 as an integral component of the evolutionarily conserved retrograde IFT machinery. In complex with several IFT dynein light chains, it is required for correct vertebrate skeletal formation but may be functionally redundant under certain conditions.
This paper presents new carbon, nitrogen and sulphur isotope data for European fallow deer (Dama dama dama) in Roman Britain and discusses results in light of evidence from classical texts, landscape archaeology, zooarchaeology and the limited available samples of metric data. The new isotope data presented here are from Fishbourne Roman Palace (Sussex), two sites on the Isle of Thanet (Kent) and a further two sites in London. In spite of small sample sizes the data make an important contribution to the very limited corpus of scientific research on the species and provide new resolution to the nature of fallow deer movement and management in Roman Britain.
As the cumulative volume of ecofactual data from archaeological sites mounts, the analytical tools required for its synthesis have not always kept pace. While recent attention has been devoted to spatial aspects of meta-analysis, the methodological challenges of chronological synthesis have been somewhat neglected. Nowhere is this issue more acute than for urban sites, where complex, well-dated stratigraphy; rich organic remains; and multiple small-to medium-scale excavations often lead to an abundance of small datasets with cross-cutting phasing and varied chronological resolution. Individually these may be of limited value, but together they can represent the environmental and socioeconomic history of a city. The challenge lies in developing tools for effective synthesis.This paper demonstrates a new approach to chronological meta-analysis of ecofactual data, based upon (a) use of simulation to deal with dating uncertainty, and (b) calibration of results for variable research intensity. We apply this approach to a large body of historic-period fish bone data from London, revealing otherwise undetectable detail regarding one of the most profound shifts in medieval English economic and environmental history: the sudden onset of marine fishing commonly known as the Fish Event Horizon. Most importantly, we show that this phenomenon predates any visible decline in deposition of freshwater fish, and hence cannot have been driven by depletion of inland fisheries as has sometimes been suggested.The R package developed for this research, archSeries, is freely available.Keywords: zooarchaeology; meta-analysis; medieval fishing; environmental history; chronological uncertainty; urban archaeology; fish bones; aoristic analysis; Fish Event Horizon; sampling intensity
IntroductionRecent decades have seen widespread recovery and analysis of a wide suite of ecofactual remains from archaeological sites, particularly in territories with systematic frameworks and guidance for development-led archaeology. As the cumulative volume of ecofactual data has mounted, however, the analytical tools required for its synthesis across space and time have not always kept pace. While recent attention has been devoted to spatial aspects of meta-analysis, particularly through increasingly sophisticated applications of GIS (see e.g. Livarda and Orengo 2015; McKechnie and Moss 2016), the methodological and statistical challenges of chronological synthesis have been somewhat neglected.Nowhere is this issue more acute than for urban archaeological sites. A typical combination of complex, well-dated stratigraphy, rich organic remains, and multiple small-to medium-scale excavations often leads to an abundance of small datasets with cross-cutting phasing and varied chronological resolution. Separately, many of these datasets are of limited value; together they can represent the environmental and socio-economic history of a city. The quality of excavation and documentation in this context is often very high, but the resources available for subsequent a...
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