No abstract

Widely distributed taxa provide an opportunity to compare biogeographic responses to climatic fluctuations on multiple continents and to investigate speciation. We conducted the most geographically and genomically comprehensive study to date of the red fox (Vulpes vulpes), the world's most widely distributed wild terrestrial carnivore. Analyses of 697 bp of mitochondrial sequence in ~1000 individuals suggested an ancient Middle Eastern origin for all extant red foxes and a 400 kya (SD = 139 kya) origin of the primary North American (Nearctic) clade. Demographic analyses indicated a major expansion in Eurasia during the last glaciation (~50 kya), coinciding with a previously described secondary transfer of a single matriline (Holarctic) to North America. In contrast, North American matrilines (including the transferred portion of Holarctic clade) exhibited no signatures of expansion until the end of the Pleistocene (~12 kya). Analyses of 11 autosomal loci from a subset of foxes supported the colonization time frame suggested by mtDNA (and the fossil record) but, in contrast, reflected no detectable secondary transfer, resulting in the most fundamental genomic division of red foxes at the Bering Strait. Endemic continental Y-chromosome clades further supported this pattern. Thus, intercontinental genomic exchange was overall very limited, consistent with long-term reproductive isolation since the initial colonization of North America. Based on continental divergence times in other carnivoran species pairs, our findings support a model of peripatric speciation and are consistent with the previous classification of the North American red fox as a distinct species, V. fulva.

No abstract

Digital photography enables researchers to rapidly compile large quantities of data from individually identifiable animals, and computer software improves the management of such large datasets while aiding the identification process. Wild-ID software has performed well with uniform datasets controlling for angle and portion of the animal photographed; however, few datasets are collected under such controlled conditions. We examined the effectiveness of Wild-ID in identifying individual Thornicroft's giraffe from a dataset of photographs (n = 552) collected opportunistically in the Luangwa Valley, Zambia from March to October 2009. We assessed the programme's accuracy in correctly identifying individuals and the effect of five image quality factors on identification success: blurriness, background type and complexity, amount of sky and the presence of other giraffe. The programme correctly identified individuals in 71.6% of photographs. Background complexity was the only significant variable affecting identification success and removing background imagery reduced identification error by 52.8% (from 28.4 to 13.4%). Our results indicate higher levels of error than previously reported for Wild-ID. However, they also suggest the programme is an effective tool for quickly identifying individuals in large field datasets, especially if photograph backgrounds are removed beforehand and postanalysis visual verification is performed. 13.4%). Nos r esultats indiquent un taux d'erreur sup erieur a ce qui etait pr ec edemment indiqu e pour Wild-ID, mais ils sugg erent aussi que ce programme est un outil efficace pour identifier rapidement des individus dans un vaste ensemble de donn ees de terrain pour autant que le fond des photos soit enlev e avant analyse et qu'une v erification visuelle postanalyse soit r ealis ee.

No abstract

Competition often occurs between sympatric species that exploit similar ecological niches. Among canids, competition may be reduced by partitioning resources such as food, time, and habitat, but the mechanisms of coexistence remain poorly understood, particularly among fox species. We described the food habits of two foxes that live sympatrically across northern and central Asia, the corsac fox (Vulpes corsac) and red fox (V. vulpes), by analyzing scats collected during a field study in Mongolia. We analyzed 829 corsac and 995 red fox scats collected from April 2005 to August 2007 and tested the extent to which food partitioning occurred. The diets of both species consisted mainly of insects followed by rodents, but also included birds, reptiles, large mammal remains (carrion), plant material (including fruits and seeds), and garbage. Despite high overlap in the proportion of food items consumed, differences existed between species in overall diet with corsacs more frequently consuming beetles, but proportionally fewer crickets and large mammal remains than red foxes. We detected interspecific differences during the pup rearing and dispersal seasons, when prey was abundant, but not during the breeding season, when prey was scarce and diet overlap highest. Each species' diet also differed seasonally and exhibited moderate overall breadth. Corsacs consumed proportionally more beetles and rodents during pup rearing and crickets during dispersal relative to other seasons, whereas red foxes consumed proportionally more crickets during pup rearing and dispersal and more rodents and large mammals during pup rearing and breeding relative to other seasons. Our results suggest that partitioning of food resources during most of the year facilitates coexistence, and that the potential for competition is highest during winter months.

No abstract

In arid regions of the developing world, pastoralists and livestock commonly inhabit protected areas, resulting in human-wildlife conflict. Conflict is inextricably linked to the ecological processes shaping relationships between pastoralists and native herbivores and carnivores. To elucidate relationships underpinning human-wildlife conflict, we synthesized 15 years of ecological and ethnographic data from Ikh Nart Nature Reserve in Mongolia's Gobi steppe. The density of argali (Ovis ammon), the world's largest wild sheep, at Ikh Nart was among the highest in Mongolia, yet livestock were >90% of ungulate biomass and dogs >90% of large-carnivore biomass. For argali, pastoral activities decreased food availability, increased mortality from dog predation, and potentially increased disease risk. Isotope analyses indicated that livestock accounted for >50% of the diet of the majority of gray wolves (Canis lupus) and up to 90% of diet in 25% of sampled wolves (n = 8). Livestock composed at least 96% of ungulate prey in the single wolf pack for which we collected species-specific prey data. Interviews with pastoralists indicated that wolves annually killed 1-4% of Ikh Nart's livestock, and pastoralists killed wolves in retribution. Pastoralists reduced wolf survival by killing them, but their livestock were an abundant food source for wolves. Consequently, wolf density appeared to be largely decoupled from argali density, and pastoralists had indirect effects on argali that could be negative if pastoralists increased wolf density (apparent competition) or positive if pastoralists decreased wolf predation (apparent facilitation). Ikh Nart's argali population was stable despite these threats, but livestock are increasingly dominant numerically and functionally relative to argali. To support both native wildlife and pastoral livelihoods, we suggest training dogs to not kill argali, community insurance against livestock losses to wolves, reintroducing key native prey species to hotspots of human-wolf conflict, and developing incentives for pastoralists to reduce livestock density.