BackgroundSacred lotus is a basal eudicot with agricultural, medicinal, cultural and religious importance. It was domesticated in Asia about 7,000 years ago, and cultivated for its rhizomes and seeds as a food crop. It is particularly noted for its 1,300-year seed longevity and exceptional water repellency, known as the lotus effect. The latter property is due to the nanoscopic closely packed protuberances of its self-cleaning leaf surface, which have been adapted for the manufacture of a self-cleaning industrial paint, Lotusan.ResultsThe genome of the China Antique variety of the sacred lotus was sequenced with Illumina and 454 technologies, at respective depths of 101× and 5.2×. The final assembly has a contig N50 of 38.8 kbp and a scaffold N50 of 3.4 Mbp, and covers 86.5% of the estimated 929 Mbp total genome size. The genome notably lacks the paleo-triplication observed in other eudicots, but reveals a lineage-specific duplication. The genome has evidence of slow evolution, with a 30% slower nucleotide mutation rate than observed in grape. Comparisons of the available sequenced genomes suggest a minimum gene set for vascular plants of 4,223 genes. Strikingly, the sacred lotus has 16 COG2132 multi-copper oxidase family proteins with root-specific expression; these are involved in root meristem phosphate starvation, reflecting adaptation to limited nutrient availability in an aquatic environment.ConclusionsThe slow nucleotide substitution rate makes the sacred lotus a better resource than the current standard, grape, for reconstructing the pan-eudicot genome, and should therefore accelerate comparative analysis between eudicots and monocots.

Seven years of carbon dioxide flux measurements indicate that a $ 90-year-old spruce dominated forest in Maine, USA, has been sequestering 174 AE 46 g C m À2 yr À1 (mean AE 1 standard deviation, nocturnal friction velocity (u * ) threshold 40.25 m s À1 ). An analysis of monthly flux anomalies showed that above-average spring and fall temperatures were significantly correlated with greater monthly C uptake while above-average summer temperatures were correlated with decreased net C uptake. Summer months with significantly drier or wetter soils than normal were also characterized by lower rates of C uptake. Years with above-average C storage were thus typically characterized by warmer than average spring and fall temperatures and adequate summer soil moisture.Environmental and forest-atmosphere flux data recorded from a second tower surrounded by similar forest, but sufficiently distant that flux source regions ('footprints'), did not overlap significantly showed almost identical temperature and solar radiation conditions, but some differences in energy partitioning could be seen. Half-hourly as well as integrated (annual) C exchange values recorded at the separate towers were very similar, with average annual net C uptake differing between the two towers by o6%. Interannual variability in net C exchange was found to be much greater than between tower variability. Simultaneous measurements from two towers were used to estimate flux data uncertainty from a single tower. Carbon-flux model parameters derived independently from each flux tower data set were not significantly different, demonstrating that flux towers can provide a robust method for establishing C exchange model parameters.

The automatic system yielded results that were similar to those obtained by experienced technologists. Very good ICCs were obtained for many primary PSG outcome measures. This automated scoring software, particularly if supplemented with manual editing, may increase laboratory efficiency and standardize PSG scoring results within and across sleep centers.

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Confirmatory factor analysis was used to model a multitrait-multisource design to evaluate the construct validity of attention-deficit/hyperactivity disorder (ADHD) rating scales. The 2 trait factors were the ADHD inattention and hyperactivity/impulsivity dimensions. The 2 source factors were parents and teachers. In Study 1, parents and teachers rated 1,475 Australian elementary school children on the ADHD symptoms. In Study 2, parents and teachers rated 285 Brazilian elementary school children on the ADHD symptoms. Similar results occurred in both studies with most of the ADHD symptoms containing more source than trait variance, thus providing weak evidence for the convergent and discriminant validity of the symptoms as measured by rating scales. The study outlines the implications of such strong source effects for understanding ADHD.