DNA barcoding protocols require the linkage of each sequence record to a voucher specimen that has, whenever possible, been authoritatively identified. Natural history collections would seem an ideal resource for barcode library construction, but they have never seen large-scale analysis because of concerns linked to DNA degradation. The present study examines the strength of this barrier, carrying out a comprehensive analysis of moth and butterfly (Lepidoptera) species in the Australian National Insect Collection. Protocols were developed that enabled tissue samples, specimen data, and images to be assembled rapidly. Using these methods, a five-person team processed 41,650 specimens representing 12,699 species in 14 weeks. Subsequent molecular analysis took about six months, reflecting the need for multiple rounds of PCR as sequence recovery was impacted by age, body size, and collection protocols. Despite these variables and the fact that specimens averaged 30.4 years old, barcode records were obtained from 86% of the species. In fact, one or more barcode compliant sequences (>487 bp) were recovered from virtually all species represented by five or more individuals, even when the youngest was 50 years old. By assembling specimen images, distributional data, and DNA barcode sequences on a web-accessible informatics platform, this study has greatly advanced accessibility to information on thousands of species. Moreover, much of the specimen data became publically accessible within days of its acquisition, while most sequence results saw release within three months. As such, this study reveals the speed with which DNA barcode workflows can mobilize biodiversity data, often providing the first web-accessible information for a species. These results further suggest that existing collections can enable the rapid development of a comprehensive DNA barcode library for the most diverse compartment of terrestrial biodiversity – insects.
Summary1. Quantitative host-parasitoid food webs are descriptions of community structure that include data on the abundance of hosts and parasitoids, and the frequency of links between them, all expressed in the same units. 2. Quantitative host-parasitoid food webs were constructed describing the community of leaf-mining insects (Diptera, Coleoptera and Lepidoptera) and their parasitoids (Hymenoptera) in an 8500-m 2 area of moist tropical forest in Belize, Central America, over a 1-year period. 3. The summary food web, containing data for the whole year, is we believe the most diverse quantitative host-parasitoid web yet described. It contains 93 species of leafminer, 84 species of parasitoid and 196 links between hosts and parasitoids. 4. Most parasitoids were generalists, with individual parasitoid species recorded as parasitizing up to 21 host species. In contrast, most leaf-miners were specialists, with 114 links documented between leaf-miners and their host plants. 5. A robustness analysis was used to reveal the effects of different sampling intensities on food web statistics. The results suggest that the sampling had revealed most of the species of host and parasitoid in the community, but further interactions among species would continue to be detected with additional sampling. Measures of the ratio of hosts to parasitoids and of realized connectance were relatively insensitive to sampling intensity. 6. Three seasonal webs were constructed, revealing temporal changes in the structure of the community. There was greater turnover in host species composition than parasitoid species composition among seasons, but most web statistics remained relatively constant across seasons. 7. Both the summary web and the seasonal webs show low levels of compartmentalization, suggesting that the host-parasitoid community is not divided into relatively discrete subwebs with largely independent dynamics. 8. The extent of potential indirect interactions between pairs of hosts was assessed by constructing quantitative parasitoid overlap graphs. These suggest that abundant species are likely to have greater indirect effects on less abundant species than vice versa, and that species in the same taxonomic order are more likely to interact indirectly. The graphs do not support the hypothesis that species sharing the same host plant are more likely to interact via shared parasitoids.
Summary Eulophidae is a large and biologically varied family of parasitoid wasps, traditionally split into four subfamilies; Elasmidae is a uniform (single genus) and morphologically distinct family of wasps that are thought to be related to Eulophidae. The D2 region of the 28S rDNA gene (≈ 560 bp) of eighty‐seven species of eulophid, three species of elasmid and sixteen outgroup species in five families was sequenced. Cladograms were constructed, and the results compared with conclusions drawn from morphological studies. The gene was most informative at the level of subfamily and tribe. The monophyly of both Eulophinae and Tetrastichinae is supported; that of Entedoninae and Euderinae is less clear. Results indicate that Eulophinae is a derived group within Eulophidae, rather than an ancestral group as previously thought, and that Elasmus, the sole genus of Elasmidae, belongs within this subfamily. The tribes of Eulophinae are reassessed and only three accepted: Eulophini (including Euplectrini and Elachertini), Elasmini and Cirrospilini LaSalle trib.n. for Bouček's Ophelimini with Ophelimus and Australsecodes excluded. Three small Australian tribes, Anselmellini, Ophelimini and Platytetracampini, are removed from Eulophinae and Entedoninae, respectively, but their exact relationships and subfamily status cannot as yet be decided. Another tribe, Keryini, known from a single Australian genus, is excluded from both Eulophinae and Eulophidae.
The Australian insect fauna is highly endemic and characterised by numerous unique higher‐level taxa. In addition, a number of groups are noticeably absent or depauperate on the continent. Many groups found in Australia show characteristic Gondwanan distribution patterns on the southern continents. There are extensive radiations on the plant families Myrtaceae and Mimosaceae, a specialised arid/semiarid fauna, and diverse taxa associated with rainforests and seasonally wet tropical regions. The fauna is also poorly studied, particularly when compared with the flora and vertebrate groups. However, studies in the last two decades have provided a more comprehensive picture of the size of the fauna, relationships, levels of endemism, origins and its evolution. Here we provide an overview of these and other aspects of Australian insect diversity, focusing on six groups, the Thysanoptera and the five megadiverse orders Hemiptera, Coleoptera, Diptera, Lepidoptera and Hymenoptera.
Collections of biological specimens are fundamental to scientific understanding and characterization of natural diversity—past, present and future. This paper presents a system for liberating useful information from physical collections by bringing specimens into the digital domain so they can be more readily shared, analyzed, annotated and compared. It focuses on insects and is strongly motivated by the desire to accelerate and augment current practices in insect taxonomy which predominantly use text, 2D diagrams and images to describe and characterize species. While these traditional kinds of descriptions are informative and useful, they cannot cover insect specimens “from all angles” and precious specimens are still exchanged between researchers and collections for this reason. Furthermore, insects can be complex in structure and pose many challenges to computer vision systems. We present a new prototype for a practical, cost-effective system of off-the-shelf components to acquire natural-colour 3D models of insects from around 3 mm to 30 mm in length. (“Natural-colour” is used to contrast with “false-colour”, i.e., colour generated from, or applied to, gray-scale data post-acquisition.) Colour images are captured from different angles and focal depths using a digital single lens reflex (DSLR) camera rig and two-axis turntable. These 2D images are processed into 3D reconstructions using software based on a visual hull algorithm. The resulting models are compact (around 10 megabytes), afford excellent optical resolution, and can be readily embedded into documents and web pages, as well as viewed on mobile devices. The system is portable, safe, relatively affordable, and complements the sort of volumetric data that can be acquired by computed tomography. This system provides a new way to augment the description and documentation of insect species holotypes, reducing the need to handle or ship specimens. It opens up new opportunities to collect data for research, education, art, entertainment, biodiversity assessment and biosecurity control.
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