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Summary 1.Wild large herbivores provide goods and income to rural communities, have major impacts on land use and habitats of conservation importance and, in some cases, face local or global extinction. As a result, substantial effort is applied to their management across the globe. To be effective, however, management has to be science-based. We reviewed recent fundamental and applied studies of large herbivores with particular emphasis on the relationship between the spatial and temporal scales of ecosystem response, management decision and implementation. 2. Long-term population dynamics research has revealed fundamental differences in how sex/age classes are affected by changes in density and weather. Consequently, management must be tailored to the age and sex structure of the population, rather than to simple population counts. 3. Herbivory by large ungulates shapes the structure, diversity and functioning of most terrestrial ecosystems. Recent research has shown that fundamental herbivore/vegetation interactions driving landscape change are localized, often at scales of a few metres. For example, sheep and deer will selectively browse heather Calluna vulgaris at the edge of preferred grass patches in heather moorland. As heather is vulnerable to heavy defoliation, in the long term this can lead to loss of heather cover despite the average utilization rate of heather in a management area being low. Therefore, while herbivore population management requires a large-scale approach, management of herbivore impacts on vegetation may require a much more flexible and site-specific approach. 4. Localized impacts on vegetation have cascading effects on biodiversity, because changes in vegetation structure and composition, induced by large herbivores affect habitat suitability for many other species. As such, grazing should be considered as a tool for broader biodiversity management requiring a more sophisticated approach than just, for example, eliminating grazing from conservation areas through the use of exclosures. 5. Synthesis and applications . The management of wild large herbivores must consider different spatial scales, from small patches of vegetation to boundaries of an animal population. It also requires long-term planning based on a deep understanding of how population processes, such a birth rate, death rate and age structure, are affected by changes in land use and climate and how these affect localized herbivore impacts. Because wild herbivores do not observe administrative or political boundaries, adjusting their management to socio-political realities can present a challenge. Many developing countries have established co-operative management groups that allow all interested parties to be involved in the development of management plans; developed countries have a lot to learn from the developing world's example.

This article provides a context to, attempts an explanation for, and proposes a response to the recent demonstration of rapid and severe decline of the native mammal fauna of Kakadu National Park. This decline is consistent with, but might be more accentuated than, declines reported elsewhere in northern Australia; however, such a comparison is constrained by the sparse information base across this region. Disconcertingly, the decline has similarities with the earlier phase of mammal extinctions that occurred elsewhere in Australia. We considered four proximate factors (individually or interactively) that might be driving the observed decline: habitat change, predation (by feral cats), poisoning (by invading cane toads), and novel disease. No single factor readily explains the current decline. The current rapid decline of mammals in Kakadu National Park and northern Australia suggests that the fate of biodiversity globally might be even bleaker than evident in recent reviews, and that the establishment of conservation reserves alone is insufficient to maintain biodiversity. This latter conclusion is not new; but the results reported here further stress the need to manage reserves far more intensively, purposefully, and effectively, and to audit regularly their biodiversity conservation performance.

1. The species composition and spatial distribution of small insects (Hemiptera, Coleoptera, Lepidoptera) and arachnids (Araneae, Opiliones, and Pseudoscorpiones) were investigated in three indigenous, upland grasslands identified as the National Vegetation Classification Festuca-Agrostis-Galium typical subcommunity (code U4a), Festuca-Agrostis-Galium, Vaccinium-Deschampsia subcommunity (code U4e), and Nardus stricta species-poor sub-community (code U5a), on which grazing management was manipulated experimentally.2. Two hypotheses were tested that predicted arthropod diversity in upland grasslands. The habitat heterogeneity hypothesis predicts that the species number and abundance of arthropods will have an asymptotic relationship with increasing numbers of plant species and greater structural heterogeneity in the vegetation. The symbiosis between patches hypothesis states that the species number and abundance of arthropods will express a unimodal relationship with the grain size of sward patches created by grazing. The sward patches must be large enough to be apparent to, and support populations of, arthropods, but small enough that interspersed tussocks provide shelter from weather and a deterrent to disturbance by grazers.3. The hypotheses were tested by sampling arthropods from the geometrical patterns represented by the individual tussocks and intermediate sward components of three indigenous grasslands produced by different grazing treatments. Paired samples of arthropods were taken by motorized suction sampler, the first of the pair from the grazed sward and the second, the accumulated samples from the surrounding triad of tussocks (U4a and U5a grasslands) or hummocks (U4e grassland). The paired samples were taken from six randomly-selected locations across both replicates of each of the grazing treatments.4. Arthropod species composition and abundance were compared between the paired sward and tussock samples and in turn with measures of the vertical and horizontal components of vegetation structure, i.e. the variance in vegetation height per unit area and the area covered by tussock compared with sward.5. There were consistently more species and a greater abundance of arthropods associated with tussocks than with swards and the average species number and abundance for the combined pair of samples declined with increased grazing pressure. The relationship between vertical and horizontal components of vegetation structure and the species number and abundance of selected arthropods was asymptotic as opposed to unimodal, supporting the habitat heterogeneity hypothesis, rather than the symbiosis between patches hypothesis. 254 P. Dennis et al. 6. Small and relatively sedentary insects and arachnids are more sensitive to grazing intensity and species of grazer in these upland, indigenous grasslands than are larger Coleoptera and Araneae, which respond less directly to varied grazing management. The overall linear reduction of small herbivorous and predatory arthropods with increased grazing intensity was bu...

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Landscape features have been shown to strongly influence dispersal and, consequently, the genetic population structure of organisms. Studies quantifying the effect of landscape features on gene flow of large mammals with high dispersal capabilities are rare and have mainly been focused at large geographical scales. In this study, we assessed the influence of several natural and human-made landscape features on red deer gene flow in the Scottish Highlands by analysing 695 individuals for 21 microsatellite markers. Despite the relatively small scale of the study area (115 x 87 km), significant population structure was found using F-statistics (F(ST) = 0.019) and the program structure, with major differentiation found between populations sampled on either side of the main geographical barrier (the Great Glen). To assess the effect of landscape features on red deer population structure, the ArcMap GIS was used to create cost-distance matrices for moving between populations, using a range of cost values for each of the landscape features under consideration. Landscape features were shown to significantly affect red deer gene flow as they explained a greater proportion of the genetic variation than the geographical distance between populations. Sea lochs were found to be the most important red deer gene flow barriers in our study area, followed by mountain slopes, roads and forests. Inland lochs and rivers were identified as landscape features that might facilitate gene flow of red deer. Additionally, we explored the effect of choosing arbitrary cell cost values to construct least cost-distance matrices and described a method for improving the selection of cell cost values for a particular landscape feature.

Metagenomics holds enormous promise for discovering novel enzymes and organisms that are biomarkers or causes of processes relevant to disease, industry and the environment. In the last two years we have seen a paradigm shift in metagenomics to the application of broad cross-sectional and longitudinal studies enabled by advances in DNA sequencing and high-performance computing. These technologies now make it possible to broadly assess microbial diversity and function, allowing systematic investigation of the largely unexplored frontier of microbial life. To achieve this aim, the global scientific community must collaborate and agree upon common objectives and data standards to enable comparative research across the Earth’s microbiome. Improvements in comparability of data will facilitate the study of biotechnologically relevant processes such as bioprospecting for new glycoside hydrolases or identifying novel energy sources.

Aim A third of all modern (after 1500) mammal extinctions (24/77) are Australian species. These extinctions have been restricted to southern Australia, predominantly in species of ‘critical weight range’ (35–5500 g) in drier climate zones. Introduced red foxes (Vulpes vulpes) that prey on species in this range are often blamed. A new wave of declines is now affecting a globally significant proportion of marsupial species (19 species) in the fox‐free northern tropics. We aim to test plausible causes of recent declines in range and determine if mechanisms differ between current tropical declines and past declines, which were in southern (non‐tropical) regions. Location Australian continent Methods We used multiple regression and random forest models to analyse traits that were associated with declines in species range, and compare variables associated with past extinctions in the southern zones with current tropical (northern) declines. Results The same two key variables, body mass and habitat structure, were associated with proportion‐of‐decline in range throughout the continent, but the form of relationships differs with latitude. In the south, medium‐sized species in open habitats of lower rainfall were most likely to decline. In the tropics, small species that occupy open vegetation with moderate rainfall (savanna) are now experiencing the most severe declines. Throughout the continent, large‐bodied species and those in structurally complex habitats (rainforest) are secure. Main conclusions Our results indicate that there is no mid‐sized ‘critical weight range’ in the north. Because foxes are absent from the tropics, we suggest that northern Australian marsupial declines are associated with predation by feral cats (Felis catus) exacerbated by reduced ground level vegetation in non‐rainforest habitats. To test this, we recommend experiments to remove cats from some locations where tropical mammals are threatened. Our results show that comparative analysis can help to diagnose potential causes of multi‐species decline.