The hybrid CASPT2/MM approach is employed to systematically study the ground and low-lying excited states of the ultimate active species of the enzymes P450cam and chloroperoxidase (CPO): the oxoiron(IV)-porphyrin cation-radical Por(•+)Fe(IV)═O(Cys) species, the so-called Compound I (Cpd I). The results underscore the fact that the B3LYP/MM method is quite accurate on the most part. However, the CASPT2/MM energies for the ferryl-pentaradicaloid quartet state and the perferryl Fe(V)O doublet and quartet states are significantly lower than the B3LYP/MM results. Thus, while the present CASPT2/MM may still overestimate the stability of these states, nevertheless, taken at its face value, the result raises the question whether these states actually contribute to the reactivity of Cpd I. Our paper tries to grapple with this question in view of (a) the recent speculations that the perferryl Fe(V)O states may be involved in unusual reactivities of Cpd I species (Pan, Z. Z.; Wang, Q.; Sheng, X.; Horner, J. H.; Newcomb, M. J. Am. Chem. Soc. 2009, 131, 2621-2628) and (b) the DFT/MM results which show that the pentaradicaloid states have intrinsically low barriers for H-abstraction (Altun, A.; Shaik, S.; Thiel, W. J. Am. Chem. Soc. 2007, 129, 8978-8987). The application of CASPT2/MM to high valent transition metal states like the perferryl are far from being trivial, and the experience and insight gained in this study are expected to be helpful for future successful application of this type of method to resolve key issues in P450 reactivity.
Phosphorus (P), zinc (Zn), and iron (Fe) are three essential elements for plant survival, and severe deficiencies in these nutrients lead to growth retardation and crop yield reduction. This review synthesizes recent progress on how plants coordinate the acquisition and signaling of Pi, Zn, and Fe from surrounding environments and which genes are involved in these Pi–Zn–Fe interactions with the aim of better understanding of the cross-talk between these macronutrient and micronutrient homeostasis in plants. In addition, identification of genes important for interactions between Pi, Zn, and/or Fe transport and signaling is a useful target for breeders for improvement in plant nutrient acquisition. Furthermore, to understand these processes in arbuscular mycorrhizal plants, the preliminary examination of interactions between Pi, Zn, and Fe homeostasis in some relevant crop species has been performed at the physiological level and is summarized in this article. In conclusion, the development of integrative study of cross-talks between Pi, Zn, and Fe signaling pathway in mycorrhizal plants will be essential for sustainable agriculture all around the world.
Understanding the roles of arbuscular mycorrhizal fungi (AMF) in plant interaction is essential for optimizing plant distribution to restore degraded ecosystems. This study investigated the effects of AMF and the presence of legume or grass herbs on phytoremediation with a legume tree, Robinia pseudoacacia, in Pb polluted soil. In monoculture, mycorrhizal dependency of legumes was higher than that of grass, and AMF benefited the plant biomass of legumes but had no effect on grass. Mycorrhizal colonization of plant was enhanced by legume neighbors but inhibited by grass neighbor in co-culture system. N, P, S and Mg concentrations of mycorrhizal legumes were larger than these of non-mycorrhizal legumes. Legume herbs decreased soil pH and thereby increased the Pb concentrations of plants. The neighbor effects of legumes shifted from negative to positive with increasing Pb stress levels, whereas grass provided a negative effect on the growth of legume tree. AMF enhanced the competition but equalized growth of legume-legume under unpolluted and Pb stress conditions, respectively. In conclusion, (1) AMF mediate plant interaction through directly influencing plant biomass, and/or indirectly influencing plant photosynthesis, macronutrient acquisition, (2) legume tree inoculated with AMF and co-planted with legume herbs provides an effective way for Pb phytoremediation.
A randomized, dose-escalating study evaluated the pharmacokinetics of single and multiple oral doses of pirfenidone, a promising antifibrotic agent, in 48 healthy Chinese volunteers. The effects of sex and food on the pharmacokinetics of pirfenidone were also evaluated. Pharmacokinetics was determined from serial blood samples obtained up to 12 hours after administration of single 200-, 400-, or 600-mg doses of pirfenidone and after multiple doses of 400 mg administrated 3 times daily (tid). Plasma levels of pirfenidone and areas under the curve were found to be proportional to dose. Pirfenidone was rapidly absorbed (t(max) = 0.33-1 hours) and cleared (t((1/2)) = 2-2.5 hours). Pharmacokinetic parameters after multiple doses were similar to those after single doses. Food had a significant effect (P < .01) on the extent of absorption (AUC(0-infinity) = 37.4 +/- 15.4 mg x h/L [fed] vs 46.6 +/- 16.8 mg x h/L [fasted]), rate of absorption was considerably (P < .001) prolonged (t(max) = 1.5 +/- 0.4 hours [fed] vs 0.7 +/- 0.2 hours [fasted]), and peak concentrations were significantly (P < .001) decreased (C(max) = 9.2 +/- 2.9 mg/L [fed] vs 13.0 +/- 1.8 mg/L [fasted]). No significant sex differences were noted for pharmacokinetic variables. Pirfenidone was well tolerated. These results support a tid regimen of pirfenidone for the management of idiopathic pulmonary fibrosis. Concomitant intake of food will reduce the rate and extent (about 20%) of absorption, which is associated with better tolerability of pirfenidone.
Abstract. Plant transpiration links physiological responses of
vegetation to water supply and demand with hydrological, energy, and carbon
budgets at the land–atmosphere interface. However, despite being the main
land evaporative flux at the global scale, transpiration and its response to
environmental drivers are currently not well constrained by observations.
Here we introduce the first global compilation of whole-plant transpiration
data from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021).
We harmonized and quality-controlled individual datasets supplied by
contributors worldwide in a semi-automatic data workflow implemented in the
R programming language. Datasets include sub-daily time series of sap flow
and hydrometeorological drivers for one or more growing seasons, as well as
metadata on the stand characteristics, plant attributes, and technical
details of the measurements. SAPFLUXNET contains 202 globally distributed
datasets with sap flow time series for 2714 plants, mostly trees, of 174
species. SAPFLUXNET has a broad bioclimatic coverage, with
woodland/shrubland and temperate forest biomes especially well represented
(80 % of the datasets). The measurements cover a wide variety of stand
structural characteristics and plant sizes. The datasets encompass the
period between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data are
available for most of the datasets, while on-site soil water content is
available for 56 % of the datasets. Many datasets contain data for species
that make up 90 % or more of the total stand basal area, allowing the
estimation of stand transpiration in diverse ecological settings. SAPFLUXNET
adds to existing plant trait datasets, ecosystem flux networks, and remote
sensing products to help increase our understanding of plant water use,
plant responses to drought, and ecohydrological processes. SAPFLUXNET version
0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The
“sapfluxnetr” R package – designed to access, visualize, and process
SAPFLUXNET data – is available from CRAN.
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