The selective genotyping approach, where only individuals from the high and low extremes of the trait distribution are selected for genotyping and the remaining individuals are not genotyped, has been known as a cost-saving strategy to reduce genotyping work and can still maintain nearly equivalent efficiency to complete genotyping in QTL mapping. We propose a novel and simple statistical method based on the normal mixture model for selective genotyping when both genotyped and ungenotyped individuals are fitted in the model for QTL analysis. Compared to the existing methods, the main feature of our model is that we first provide a simple way for obtaining the distribution of QTL genotypes for the ungenotyped individuals and then use it, rather than the population distribution of QTL genotypes as in the existing methods, to fit the ungenotyped individuals in model construction. Another feature is that the proposed method is developed on the basis of a multiple-QTL model and has a simple estimation procedure similar to that for complete genotyping. As a result, the proposed method has the ability to provide better QTL resolution, analyze QTL epistasis, and tackle multiple QTL problem under selective genotyping. In addition, a truncated normal mixture model based on a multiple-QTL model is developed when only the genotyped individuals are considered in the analysis, so that the two different types of models can be compared and investigated in selective genotyping. The issue in determining threshold values for selective genotyping in QTL mapping is also discussed. Simulation studies are performed to evaluate the proposed methods, compare the different models, and study the QTL mapping properties in selective genotyping. The results show that the proposed method can provide greater QTL detection power and facilitate QTL mapping for selective genotyping. Also, selective genotyping using larger genotyping proportions may provide roughly equivalent power to complete genotyping and that using smaller genotyping proportions has difficulties doing so. The R code of our proposed method is available on http://www.stat.sinica.edu.tw/chkao/.T HE data in the QTL mapping study are usually composed of two parts, phenotypic trait values and marker genotypes, in the individuals, and the cost of producing data includes both phenotyping and genotyping costs. The cost ratio of the phenotyping to genotyping may vary significantly depending on the traits and species in studies. For a fixed budget and time frame in the study, both costs must be considered and properly allocated to make the study optimally cost effective. If the total cost is not of primary concern in QTL experiments, all individuals in the entire sample will be genotyped and phenotyped for QTL analysis.However, QTL experiments are usually conducted under a limited budget, and researchers may not be allowed to genotype and phenotype a large amount of individuals for QTL analysis. It is hence necessary to make a reasonable and effective allocation for the genotypi...
Senescence reduces the circulating number and angiogenic activity of endothelial progenitor cells (EPCs), and is associated with aging-related vascular diseases. However, it is very time-consuming to obtain aged cells (~1 month of repeated replication) or animals (~2 years) for senescence studies. Here, we established an accelerated senescence model by treating EPCs with deferoxamine (DFO), an FDA-approved iron chelator. Four days of low-dose (3 μM) DFO induced senescent phenotypes in EPCs, including a senescent pattern of protein expression, impaired mitochondrial bioenergetics, altered mitochondrial protein levels and compromised angiogenic activity. DFO-treated early EPCs from young and old donors (< 35 vs. > 70 years old) displayed similar senescent phenotypes, including elevated senescence-associated β-galactosidase activity and reduced relative telomere lengths, colony-forming units and adenosine triphosphate levels. To validate this accelerated senescence model in vivo , we intraperitoneally injected Sprague-Dawley rats with DFO for 4 weeks. Early EPCs from DFO-treated rats displayed profoundly senescent phenotypes compared to those from control rats. Additionally, in hind-limb ischemic mice, DFO pretreatment compromised EPC angiogenesis by reducing both blood perfusion and capillary density. DFO thus accelerates EPC senescence and appears to hasten model development for cellular senescence studies.
After China’s reform and opening-up, trade exchanges between China and Africa have risen sharply. Africa, a continent rich in natural resources, attracts Chinese businessmen and companies. Furthermore, many African countries strongly encourage Chinese firms to invest in. This paper aims at studying the differences in business practices between China and Africa through document analysis, interviews with experienced local businessmen. Focusing on China and two African countries (Senegal & Morocco), our findings show that the acceptance and respect of cultural differences play a key role in the capacity of Chinese companies and their African counterparts to successfully start business in both countries. Theoretical contribution, managerial implications and limitations are also discussed.
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