A loop mediated isothermal amplification (LAMP) assay for ORF1 of Neisseria gonorrhoeae was able to tolerate urea concentrations of 1.8M and below, compared with a PCR assay which was functional at concentrations of <100mM. The LAMP assay was as sensitive as the PCR assay, whilst faster and simpler to perform.Gonorrhoea is the second most common sexually transmitted infection in the developed world (1) with 106 million incidences of gonorrhoea infection reported yearly worldwide (2), representing a significant global health burden.Nucleic acid amplification testing (NAAT) for gonorrhoea is becoming more widespread. NAATs offer unparalleled specificities and sensitivities, with PCR assays typically boasting sensitivities and specificities of >95% and 100% respectively, compared with sensitivities of ~68% obtained via cultureLAMP is a novel nucleic acid amplification method, designed to amplify target nucleic acid in a highly specific and rapid manner, under isothermal conditions (4). The LAMP reaction requires a constant temperature of ~63 o C, and can be easily carried out in a water bath (5). LAMP assays enable a more rapid diagnosis than PCR based tests, offer improved sensitivities (6,7), and have a higher tolerance for inhibitors present in a number of clinical samples, including faeces and blood (8).Diagnosis of genital Neisseria gonorrhoeae infection by NAAT is carried out from a variety of sample types, including invasive swab samples and urine specimens. Urea, present in urine, is a known inhibitor of PCR at concentrations over 50mM (9). Urea prevents the non-covalent bonding of the polymerase enzyme, and also interferes with primer annealing, hence inhibiting amplification (10).Diagnostically this leads to an increase in the likelihood of false-negative results and a reduction in assay sensitivity (11). Although the concentration of urea in adult human urine is highly variable, a previous study (9) found the average concentration of urea to be ~300mM, above the minimum concentration needed for PCR inhibition. The most simple methods for nucleic acid extraction, such the preparation of a crude lysate, chelex based methods, or proteinase K digestion, are unsuitable for processing urine samples for PCR, due to their inability to remove the inhibitory urea, and the use of more complex extraction methods is recommended (12).In the present study, the minimum concentration of urea inhibitory to LAMP was determined, in order to test the suitability of the LAMP assay for testing urine samples with simple extraction methods. The detection of N.gonorrhoeae DNA from spiked urine samples was used to test this principle.N.gonorrhoeae (ATCC 19424) was cultured on chocolate agar (blood agar base, Sigma Aldrich, UK; defibrinated horse blood, TCS, UK) at 37 o C with 5% CO2.LAMP primers were designed for ORF1 of the glutamine synthetase (glnA) gene (Genbank accession number M84113) of N. gonorrhoeae. This region offers excellent diagnostic sensitivity as a PCR target for this organism (13). LAMP primers were desig...