We present release 2.0 of the ALPS (Algorithms and Libraries for Physics Simulations) project, an open source software project to develop libraries and application programs for the simulation of strongly correlated quantum lattice models such as quantum magnets, lattice bosons, and strongly correlated fermion systems. The code development is centered on common XML and HDF5 data formats, libraries to simplify and speed up code development, common evaluation and plotting tools, and simulation programs. The programs enable non-experts to start carrying out serial or parallel numerical simulations by providing basic implementations of the important algorithms for quantum lattice models: classical and quantum Monte Carlo (QMC) using non-local updates, extended ensemble simulations, exact and full diagonalization (ED), the density matrix renormalization group (DMRG) both in a static version and a dynamic time-evolving block decimation (TEBD) code, and quantum Monte Carlo solvers for dynamical mean field theory (DMFT). The ALPS libraries provide a powerful framework for programers to develop their own applications, which, for instance, greatly simplify the steps of porting a serial code onto a parallel, distributed memory machine. Major changes in release 2.0 include the use of HDF5 for binary data, evaluation tools in Python, support for the Windows operating system, the use of CMake as build system and binary installation packages for Mac OS X and Windows, and integration with the VisTrails workflow provenance tool. The software is available from our web server at http://alps.comp-phys.org/.

To examine the validity of the scenario of the deconfined critical phenomena, we carry out a quantum Monte Carlo simulation for the SU(N ) generalization of the Heisenberg model with four-body and six-body interactions. The quantum phase transition between the SU(N ) Néel and valence-bond solid phases is characterized for N = 2, 3, and 4 on the square and honeycomb lattices. While finite-size scaling analysis works well up to the maximum lattice size (L = 256) and indicates the continuous nature of the phase transition, a clear systematic change towards the first-order transition is observed in the estimates of the critical exponent y ≡ 1/ν as the system size increases. We also confirm the relevance of a squared valence-bond solid field 2 for the SU(3) model.

No abstract

No abstract

Polymethyl methacrylate (PMMA)-made prostheses used in the oral cavity were evaluated by multimodal assessment in order to elucidate the biodeterioration of PMMA. In used dentures (UD), the micro-Vickers hardness of the polished denture surface and denture basal surface was lower than that of the torn surface (p<0.05), whereas the shaved surface approximately 100 µm from the polished surface showed a similar value to the torn surface. By contrast, there were no differences among these surfaces in new resin (NR). The volatile content of UD was higher than that of NR (p<0.05). Component analysis by ATR-FTIR showed specific spectra (1,700-1,400 cm −1 ) only in UD. This study revealed that PMMA deteriorated during long-term use in the oral cavity in terms of hardness and volatile content with component alteration, and suggests the involvement of biodeterioration, possibly due to saliva and oral microbiota.

Classical 2D clock model is known to have a critical phase with Berezinskii-Kosterlitz-Thouless(BKT) transitions. These transitions have logarithmic corrections which make numerical analysis difficult. In order to resolve this difficulty, one of the authors has proposed the method called level spectroscopy, which is based on the conformal field theory. We extend this method to the multi-degenerated case. As an example, we study the classical 2D 6-clock model which can be mapped to the quantum self-dual 1D 6-clock model. Additionally, we confirm that the self-dual point has a precise numerical agreement with the analytical result, and we argue the degeneracy of the excitation states at the self-dual point from the effective field theoretical point of view.

In this part of a work devoted to the study of relativistic continua which exhibit gyromagnetic phenomena, constitutive equations are obtained for a hyperelastic solid bq the use of the thermodynamical admissibility (Clausius-Duhem inequality), the relevant potential being the magneto-free energy written in an ud hoc invariant form after application of the author's formulation of the principle of material frame indifference. The agreement with equations derived before from a variational formulation is shown.

We previously revealed that two major quantitative trait loci (QTLs) for stroke latency of the stroke-prone spontaneously hypertensive rat (SHRSP) under salt-loading were located on chromosome (Chr) 1 and 18. Here, we attempted further dissection of the stroke-QTLs using multiple congenic strains between SHRSP and a stroke-resistant hypertensive rat (SHR). Cox hazard model among subcongenic strains harboring a chromosomal fragment of Chr-1 QTL region showed that the most promising region was a 2.1 Mbp fragment between D1Rat177 and D1Rat97. The QTL region on Chr 18 could not be narrowed down by the analysis, which may be due to multiple QTLs in this region. Nonsynonymous sequence variations were found in four genes (Cblc, Cxcl17, Cic, and Ceacam 19) on the 2.1 Mbp fragment of Chr-1 QTL by whole-genome sequence analysis of SHRSP/Izm and SHR/Izm. Significant changes in protein structure were predicted in CBL-C and CXCL17 using I-TASSER. Comprehensive gene expression analysis in the kidney with a cDNA microarray identified three candidate genes (LOC102548695 (Zinc finger protein 45-like, Zfp45L), Ethe1, and Cxcl17). In conclusion, we successfully narrowed down the QTL region on Chr 1, and identified six candidate genes in this region.