Autophagy and interferon (IFN)-mediated innate immunity are critical antiviral defense mechanisms, and recent evidence indicated that tripartite motif (TRIM) proteins are important regulators of both processes. While the role of TRIM proteins in modulating antiviral cytokine responses has been well established, much less is known about their involvement in autophagy in response to different viral pathogens. Through a targeted RNAi screen examining the relevance of selected TRIM proteins in autophagy induced by herpes simplex virus 1 (HSV-1), encephalomyocarditis virus (EMCV), and influenza A virus (IAV), we identified several TRIM proteins that regulated autophagy in a virus-species specific manner, as well as a few TRIM proteins that were essential for autophagy triggered by all three viruses and rapamycin, among them TRIM23. TRIM23 was critical for autophagy-mediated restriction of multiple viruses, and this activity was dependent on both its RING E3 ligase and ADP-ribosylation factor (ARF) GTPase activity. Mechanistic studies revealed that unconventional K27-linked auto-ubiquitination of the ARF domain is essential for the GTP hydrolysis activity of TRIM23 and activation of TANK-binding kinase 1 (TBK1) by facilitating its dimerization and ability to phosphorylate the selective autophagy receptor p62. Our work identifies the TRIM23-TBK1-p62 axis as a key component of selective autophagy and further reveals a role for K27-linked ubiquitination in GTPase-dependent TBK1 activation.

loss of heterozygosity ͉ metastasis ͉ CD235a ͉ angiomyolipoma ͉ smooth muscle cells

ARL4D is a developmentally regulated member of the ADP-ribosylation factor/ARF-like protein (ARF/ARL) family of Ras-related GTPases. Although the primary structure of ARL4D is very similar to that of other ARF/ARL molecules, its function remains unclear. Cytohesin-2/ARF nucleotide-binding-site opener (ARNO) is a guanine nucleotide-exchange factor (GEF) for ARF, and, at the plasma membrane, it can activate ARF6 to regulate actin reorganization and membrane ruffling. We show here that ARL4D interacts with the C-terminal pleckstrin homology (PH) and polybasic c domains of cytohesin-2/ARNO in a GTP-dependent manner. Localization of ARL4D at the plasma membrane is GTP-and N-terminal myristoylation-dependent. ARL4D(Q80L), a putative active form of ARL4D, induced accumulation of cytohesin-2/ARNO at the plasma membrane. Consistent with a known action of cytohesin-2/ARNO, ARL4D(Q80L) increased GTP-bound ARF6 and induced disassembly of actin stress fibers. Expression of inactive cytohesin-2/ARNO(E156K) or small interfering RNA knockdown of cytohesin-2/ARNO blocked ARL4D-mediated disassembly of actin stress fibers. Similar to the results with cytohesin-2/ARNO or ARF6, reduction of ARL4D suppressed cell migration activity. Furthermore, ARL4D-induced translocation of cytohesin-2/ARNO did not require phosphoinositide 3-kinase activation. Together, these data demonstrate that ARL4D acts as a novel upstream regulator of cytohesin-2/ARNO to promote ARF6 activation and modulate actin remodeling. INTRODUCTIONADP-ribosylation factors (ARFs) are small GTPases involved in membrane transport, maintenance of organelle integrity, and activation of phospholipase D and phosphatidylinositol 4-phosphate 5-kinase Chavrier and Goud, 1999;Takai et al., 2001;D'Souza-Schorey and Chavrier, 2006). ARF1 is mainly associated with the Golgi apparatus, and it regulates vesicle budding of transport events (Stearns et al., 1990;Balch et al., 1992). ARF6 can regulate peripheral membrane dynamics and actin rearrangements at the plasma membrane (Donaldson, 2003;Sabe, 2003) such as stress fibers disassembly (D'Souza-Schorey et al., 1997;Boshans et al., 2000), formation of plasma membrane protrusions and ruffles (Radhakrishna et al., 1996;D'Souza-Schorey et al., 1997;Franco et al., 1999), cell migration (Palacios et al., 2001;Santy and Casanova, 2001), cell adhesion (Palacios et al., 2001), and regulation of endosomal membrane traffic (D'Souza-Schorey et al., 1995;Radhakrishna and Donaldson, 1997). Similar to other guanosine triphosphate (GTP)-binding proteins, ARF function depends on the highly controlled binding and hydrolysis of GTP. The conformational changes that accompany the binding of GDP or GTP can lead directly to changes in the affinity of the GTPase for proteins, lipids, and membranes. Interconversion between the two states of ARFs is most likely achieved through guanine nucleotide-exchange factors (GEFs) and GTPase-activating proteins (GAPs) Donaldson and Jackson, 2000;Jackson and Casanova, 2000).ARF-GEFs are linked to vesicular trafficking and ...