SUMMARY
Several systems-level datasets designed to dissect host-pathogen interactions during influenza A infection have been reported. However, apparent discordance among these data has hampered their full utility toward advancing mechanistic and therapeutic knowledge. To collectively reconcile these datasets, we performed a meta-analysis of data from eight published RNAi screens and integrated these data with three protein interaction datasets, including one generated within the context of this study. Further integration of these data with global virus-host interaction analyses revealed a functionally validated biochemical landscape of the influenza-host interface, which can be queried through a simplified and customizable web portal (http://www.metascape.org/IAV). Follow-up studies revealed that the putative ubiquitin ligase UBR4 associates with the viral M2 protein and promotes apical transport of viral proteins. Taken together, the integrative analysis of influenza OMICs datasets illuminates a viral-host network of high-confidence human proteins that are essential for influenza A virus replication.
A newly emerged H7N9 virus has caused 132 human infections with 37 deaths in China since 18 February 2013. Control measures in H7N9 virus-positive live poultry markets have reduced the number of infections; however, the character of the virus, including its pandemic potential, remains largely unknown. We systematically analyzed H7N9 viruses isolated from birds and humans. The viruses were genetically closely related and bound to human airway receptors; some also maintained the ability to bind to avian airway receptors. The viruses isolated from birds were nonpathogenic in chickens, ducks, and mice; however, the viruses isolated from humans caused up to 30% body weight loss in mice. Most importantly, one virus isolated from humans was highly transmissible in ferrets by respiratory droplet. Our findings indicate nothing to reduce the concern that these viruses can transmit between humans.
Acute pancreatitis is an inflammatory disease of the pancreas. The etiology and pathogenesis of acute pancreatitis have been intensively investigated for centuries worldwide. Many causes of acute pancreatitis have been discovered, but the pathogenetic theories are controversial. The most common cause of acute pancreatitis is gallstone impacting the distal common bile-pancreatic duct. The majority of investigators accept that the main factors for acute billiary pancreatitis are pancreatic hyperstimulation and bile-pancreatic duct obstruction which increase pancreatic duct pressure and active trypsin reflux. Acute pancreatitis occurs when intracellular protective mechanisms to prevent trypsinogen activation or reduce trypsin activity are overwhelmed. However, little is known about the other acute pancreatitis. We hypothesize that acute biliary pancreatitis and other causes of acute pancreatitis possess a common pathogenesis. Pancreatic hyperstimulation and pancreatic duct obstruction increase pancreatic duct pressure, active trypsin reflux, and subsequent unregulated activation of trypsin within pancreatic acinar cells. Enzyme activation within the pancreas leads to auto-digestion of the gland and local inflammation. Once the hypothesis is confirmed, traditional therapeutic strategies against acute pancreatitis may be improved. Decompression of pancreatic duct pressure should be advocated in the treatment of acute pancreatitits which may greatly improve its outcome.
Device-to-Device (D2D) communication is a key enabler to facilitate the realization of the internet of things (IoT). In this paper, we study the deployment of D2D communications as an underlay to long term evolution-advanced (LTE-A) networks based on novel architectures such as cloud radio access network (C-RAN). The challenge is that both energy efficiency (EE) and quality of service (QoS) are severely degraded by the strong intracell and intercell interference due to dense deployment and spectrum reuse. To tackle this problem, we propose an energyefficient resource allocation algorithm through joint channel selection and power allocation design. The proposed algorithm has a hybrid structure that exploits the hybrid architecture of C-RAN: distributed remote radio heads (RRHs) and centralized baseband unit (BBU) pool. The distributed resource allocation problem is modeled as a noncooperative game, and each player optimizes its EE individually with the aid of distributed RRHs. We transform the non-convex optimization problem into a convex one by applying constraint relaxation and nonlinear fractional programming. We propose a centralized interference mitigation algorithm to improve the QoS performance. The centralized algorithm consists of an interference cancellation technique and a transmission power constraint optimization technique, both of which are carried out in the centralized BBU pool. The achievable performance of the proposed algorithm is analyzed through simulations, and the implementation issues and complexity analysis Manuscript
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