The development of new genetic systems for studying the complex regulatory events that occur within Borrelia burgdorferi is an important goal of contemporary Lyme disease research. Although recent advancements have been made in the genetic manipulation of B. burgdorferi, there still remains a paucity of basic molecular systems for assessing differential gene expression in this pathogen. Herein, we describe the adaptation of two powerful genetic tools for use in B. burgdorferi. The first is a Photinus pyralis firefly luciferase gene reporter that was codon optimized to enhance translation in B. burgdorferi. Using this modified reporter, we demonstrated an increase in luciferase expression when B. burgdorferi transformed with a shuttle vector encoding the outer surface protein C (OspC) promoter fused to the luciferase reporter was cultivated in the presence of fresh rabbit blood. The second is a lac operator/repressor system that was optimized to achieve the tightest degree of regulation. Using the aforementioned luciferase reporter, we assessed the kinetics and maximal level of isopropyl-␤-D-thiogalactopyranoside (IPTG)-dependent gene expression. This lac-inducible expression system also was used to express the gene carried on lp25 required for borrelial persistence in ticks (bptA). These advancements should be generally applicable for assessing further the regulation of other genes potentially involved in virulence expression by B. burgdorferi.

The alternative sigma factor (RpoN-RpoS) pathway controls the expression of key virulence factors in Borrelia burgdorferi. However, evidence to support whether RpoN controls rpoS directly or, perhaps, indirectly via a transactivator has been lacking. Herein we provide biochemical and genetic evidence that RpoN directly controls rpoS in B. burgdorferi.Lyme disease, caused by Borrelia burgdorferi, is the most commonly reported arthropod-borne disease in both the United States and Europe (32). At the molecular level, certain membrane lipoproteins of B. burgdorferi are vital for maintaining the spirochete in its zoonotic transmission cycle between ticks and mammals. For example, the reciprocal regulation of outer surface (lipo)proteins A (OspA) and C (OspC) is the best-studied paradigm of the dramatic alterations in protein expression patterns that ensue as the spirochete transitions from the arthropod vector into mammalian tissues (8,22,30,31). Our lab determined previously that expression of OspC is regulated by the alternative sigma factor RpoS ( S ) (15, 40). RpoS, though, must first be activated by another alternative transcription factor, RpoN ( 54 / N ), resulting in an RpoNRpoS regulatory network (10, 15). However, the precise mechanism(s) by which RpoN activates rpoS has not been determined. RpoN could control rpoS expression directly by binding to a region near the rpoS open reading frame (ORF). Alternatively, another transactivator induced by RpoN might activate rpoS expression.We have been most attracted to the notion that RpoN binds directly to a region upstream of the rpoS ORF to facilitate RpoS expression in B. burgdorferi. This is because nucleotides Ϫ78 to Ϫ63 upstream of the rpoS ORF comprise a theoretical, RpoN-dependent consensus Ϫ24/Ϫ12 promoter (33, 34). Many studies with various bacteria have indicated close contact of RpoN with such a Ϫ24/Ϫ12 promoter region (5, 6, 21, 33). However, as yet, there have been no experimental data to substantiate this prediction for B. burgdorferi. The purpose of this study was to garner additional evidence that would either substantiate or refute the hypothesis that rpoS is regulated directly by RpoN.Identification of rpoS initiation of transcription. Determination of the initiation of transcription for a given gene can provide strategic information for identifying a gene's nearby promoter. rpoS transcripts of B. burgdorferi BbAH130 (41) were reverse transcribed in BD SMART-RACE (switching mechanism at 5Ј end of RNA transcript-rapid amplification of cDNA ends) reactions (BD Biosciences, San Jose, CA) using two rpoS-specific primers (rpoSR422 and rpoSR232) (Table 1), which are 422 and 232 bases, respectively, downstream of the rpoS translation start site. The BD SMART IIA primer, which anneals to the BD SMART IIA oligonucleotide linked to the 3Ј end of the first-strand cDNA, and an rpoS-specific primer upstream of the gene-specific primers used in first-strand cDNA synthesis (rpoSR125) ( Table 1) were used to amplify the resulting cDNAs. PCR-amplified inserts clo...