We prove nonexistence of breathers (spatially localized and time-periodic oscillations) for a class of Fermi-Pasta-Ulam lattices representing an uncompressed chain of beads interacting via Hertz's contact forces. We then consider the setting in which an additional on-site potential is present, motivated by the Newton's cradle under the effect of gravity. Using both direct numerical computations and a simplified asymptotic model of the oscillator chain, the so-called discrete p-Schrödinger (DpS) equation, we show the existence of discrete breathers and study their spectral properties and mobility. Due to the fully nonlinear character of Hertzian interactions, breathers are found to be much more localized than in classical nonlinear lattices and their motion occurs with less dispersion. In addition, we study numerically the excitation of a traveling breather after an impact at one end of a semi-infinite chain. This case is well described by the DpS equation when local oscillations are faster than binary collisions, a situation occuring e.g. in chains of stiff cantilevers decorated by spherical beads. When a hard anharmonic part is added to the local potential, a new type of traveling breather emerges, showing spontaneous direction-reversing in a spatially homogeneous system. Finally, the interaction of a moving breather with a point defect is also considered in the cradle system. Almost total breather reflections are observed at sufficiently high defect sizes, suggesting potential applications of such systems as shock wave reflectors.

This paper reviews results about the existence of spatially localized waves in nonlinear chains of coupled oscillators, and provides new results for the Fermi-Pasta-Ulam (FPU) lattice. Localized solutions include solitary waves of permanent form and traveling breathers which appear time periodic in a system of reference moving at constant velocity. For FPU lattices we analyze the case when the breather period and the inverse velocity are commensurate. We employ a center manifold reduction method introduced by Iooss and Kirchgassner in the case of traveling waves, which reduces the problem locally to a finite dimensional reversible differential equation. The principal part of the reduced system is integrable and admits solutions homoclinic to quasi-periodic orbits if a hardening condition on the interaction potential is satisfied. These orbits correspond to approximate travelling breather solutions superposed on a quasi-periodic oscillatory tail. The problem of their persistence for the full system is still open in the general case. We solve this problem for an even potential if the breather period equals twice the inverse velocity, and prove in that case the existence of exact traveling breather solutions superposed on an exponentially small periodic tail.

We study nonlinear waves in Newton's cradle, a classical mechanical system consisting of a chain of beads attached to linear pendula and interacting nonlinearly via Hertz's contact forces. We formally derive a spatially discrete modulation equation, for small amplitude nonlinear waves consisting of slow modulations of time-periodic linear oscillations. The fully nonlinear and unilateral interactions between beads yield a nonstandard modulation equation that we call the discrete p-Schrödinger (DpS) equation. It consists of a spatial discretization of a generalized Schrödinger equation with p-Laplacian, with fractional p > 2 depending on the exponent of Hertz's contact force. We show that the DpS equation admits explicit periodic traveling wave solutions, and numerically find a plethora of standing wave solutions given by the orbits of a discrete map, in particular spatially localized breather solutions. Using a modified Lyapunov-Schmidt technique, we prove the existence of exact periodic traveling waves in the chain of beads, close to the small amplitude modulated waves given by the DpS equation. Using numerical simulations, we show that the DpS equation captures several other important features of the dynamics in the weakly nonlinear regime, namely modulational instabilities, the existence of static and traveling breathers, and repulsive or attractive interactions of these localized structures.

The base pairs that encode the genetic information in DNA show large amplitude localized excitations called DNA breathing. We discuss the experimental observations of this phenomenon and its theoretical analysis. Starting from a model introduced to study the thermal denaturation of DNA, we show that it can qualitatively describe DNA breathing but is quantitatively not satisfactory. We show how the model can be modified to be quantitatively correct. This defines a nonlinear lattice model, which is interesting in itself because it has nonlinear localized excitations, forming a new class of discrete breather.

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We consider an infinite chain of particles linearly coupled to their nearest neighbours and subject to an anharmonic local potential. The chain is assumed weakly inhomogeneous, i.e. coupling constants, particle masses and on-site potentials can have small variations along the chain. We look for small amplitude and time-periodic solutions, and in particular spatially localized ones (discrete breathers). The problem is reformulated as a nonautonomous recurrence in a space of time-periodic functions, where the dynamics is considered along the discrete spatial coordinate. Generalizing to nonautonomous maps a centre manifold theorem previously obtained for infinite-dimensional autonomous maps [Jam03], we show that small amplitude oscillations are determined by finite-dimensional nonautonomous mappings, whose dimension * Corresponding author 1 depends on the solutions frequency. We consider the case of two-dimensional reduced mappings, which occurs for frequencies close to the edges of the phonon band (computed for the unperturbed homogeneous chain). For an homogeneous chain, the reduced map is autonomous and reversible, and bifurcations of reversible homoclinic orbits or heteroclinic solutions are found for appropriate parameter values. These orbits correspond respectively to discrete breathers for the infinite chain, or "dark" breathers superposed on a spatially extended standing wave. Breather existence is shown in some cases for any value of the coupling constant, which generalizes (for small amplitude solutions) an existence result obtained by MacKay and Aubry at small coupling [MA94]. For an inhomogeneous chain the study of the nonautonomous reduced map is in general far more involved. Here this problem is considered when the chain presents a finite number of defects. For the principal part of the reduced recurrence, using the assumption of weak inhomogeneity, we show that homoclinics to 0 exist when the image of the unstable manifold under a linear transformation (depending on the defect sequence) intersects the stable manifold. This provides a geometrical understanding of tangent bifurcations of discrete breathers commonly observed in classes of systems with impurities as defect strengths are varied. The case of a mass impurity is studied in detail, and our geometrical analysis is successfully compared with direct numerical simulations. In addition, a class of homoclinic orbits is shown to persist for the full reduced mapping and yields a family of discrete breathers with maximal amplitude at the impurity site.

When it is viewed at the scale of a base pair, DNA appears as a nonlinear lattice. Modelling its properties is a fascinating goal. The detailed experiments that can be performed on this system impose constraints on the models and can be used as a guide to improve them. There are nevertheless many open problems, particularly to describe DNA at the scale of a few tens of base pairs, which is relevant for many biological phenomena.