This 10-year field data study explores the relevance of water level fluctuations in driving the shift from a free-floating plant (FFP) to a phytoplankton dominated state in a shallow floodplain lake from the Lower Paraná River. The multi-year natural flood pulse pattern in the Lower Paraná River drove the ecosystem regime from a FFP-dominant state during very high waters (1998)(1999) to absolute phytoplankton prevalence with blooms of nitrogen fixing Cyanobacteria during extreme low waters (2008)(2009). Satellite images support the observed changes over the decade and show the decrease of the surface lake area covered by FFP as well as the modification of the spectral firm in open waters, which documents the significant increases in phytoplankton chlorophyll a concentrations. We discuss the possibility that, despite a slow eutrophication in these highly vegetated systems, water level changes and not nutrients account for the shift from a floating macrophyte community to phytoplankton dominance. Cyclic shifts may occur in response to the seasonal floodpulse, but more strongly, as indicated by our results, in association to the extreme drought and flood events related to the El Niño Southern Oscillation, which is linked to discharge anomalies in the Paraná River.

In this study, we analyse the spatial distribution of cyanobacterial summer blooms in a large subtropical reservoir located in the Uruguay River, from 2007 to 2011; these extraordinary algal growth events are mainly represented by scum-forming and nitrogen-fixing eco-strategists of the Dolichospermum and Microcystis genera. The use of the eco-strategists approach, based on ecophysiological work and field observations, allowed us to explain the differences in the distribution pattern and temporal dynamics of both cyanobacterial complexes. Spatial differences were produced due to much higher and fluctuating cyanobacterial abundances at the right margin of the reservoir and at the littoral areas closer to the dam. Satellite imagery (LANDSAT 5 TM) clearly depicted the stronger algal development in the reservoir arms and in the section closer to the dam. The Microcystis spp. complex achieved higher density than the Dolichospermum spp. complex. We hypothesise that the hydrological cycle explains the interannual fluctuations of the intensity and frequency of cyanobacterial blooms, and that spatial differences in cyanobacterial presence between the reservoir arms, its margins and the main channel is mainly a response to morphometrical and hydrological characteristics.