The Alzheimer's Disease Neuroimaging Initiative (ADNI) is a longitudinal multisite observational study of healthy elders, mild cognitive impairment (MCI), and Alzheimer's disease. Magnetic resonance imaging (MRI), (18F)-fluorodeoxyglucose positron emission tomography (FDG PET), urine serum, and cerebrospinal fluid (CSF) biomarkers, as well as clinical/psychometric assessments are acquiredat multiple time points. All data will be cross-linked and made available to the general scientific community. The purpose of this report is to describe the MRI methods employed in ADNI. The ADNI MRI core established specifications thatguided protocol development. A major effort was
High-quality prostate images were obtained with transceiver arrays at 7T after performing subject-dependent local transmit B 1 (B 1 ؉ ) shimming to minimize B 1 ؉ losses resulting from destructive interferences. B 1 ؉ shimming was performed by altering the input phase of individual RF channels based on relative B 1 ؉ phase maps rapidly obtained in vivo for each channel of an eight-element stripline coil. The relative transmit phases needed to maximize B 1 ؉ coherence within a limited region around the prostate greatly differed from those dictated by coil geometry and were highly subject-dependent. A set of transmit phases determined by B 1 ؉ shimming provided a gain in transmit efficiency of 4.2 ؎ 2.7 in the prostate when compared to the standard transmit phases determined by coil geometry. This increased efficiency resulted in large reductions in required RF power for a given flip angle in the prostate which, when accounted for in modeling studies, resulted in significant reductions of local specific absorption rates. Additionally, B 1 ؉ shimming decreased B 1 ؉ nonuniformity within the prostate from
Recent experimental data suggest that adiposity directly damages the heart by promoting ectopic deposition of triglyceride, a process known as myocardial steatosis. The goal of this study was to develop and validate proton magnetic resonance spectroscopy (
Immunohistochemical (IHC) assays performed on formalin-fixed paraffin-embedded (FFPE) tissue sections traditionally have been semi-quantified by pathologist visual scoring of staining. IHC is useful for validating biomarkers discovered through genomics methods as large clinical repositories of FFPE specimens support the construction of tissue microarrays (TMAs) for high throughput studies. Due to the ubiquitous availability of IHC techniques in clinical laboratories, validated IHC biomarkers may be translated readily into clinical use. However, the method of pathologist semi-quantification is costly, inherently subjective, and produces ordinal rather than continuous variable data. Computer-aided analysis of digitized whole slide images may overcome these limitations. Using TMAs representing 215 ovarian serous carcinoma specimens stained for S100A1, we assessed the degree to which data obtained using computer-aided methods correlated with data obtained by pathologist visual scoring. To evaluate computer-aided image classification, IHC staining within pathologist annotated and software-classified areas of carcinoma were compared for each case. Two metrics for IHC staining were used: the percentage of carcinoma with S100A1 staining (%Pos), and the product of the staining intensity (optical density [OD] of staining) multiplied by the percentage of carcinoma with S100A1 staining (OD*%Pos). A comparison of the IHC staining data obtained from manual annotations and software-derived annotations showed strong agreement, indicating that software efficiently classifies carcinomatous areas within IHC slide images. Comparisons of IHC intensity data derived using pixel analysis software versus pathologist visual scoring demonstrated high Spearman correlations of 0.88 for %Pos (p < 0.0001) and 0.90 for OD*%Pos (p < 0.0001). This study demonstrated that computer-aided methods to classify image areas of interest (e.g., carcinomatous areas of tissue specimens) and quantify IHC staining intensity within those areas can produce highly similar data to visual evaluation by a pathologist.Virtual slidesThe virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/1649068103671302
MRI of the prostate performed at 3 T using an endorectal coil produces high-quality T2-weighted images; however, specificity for prostate cancer is improved by also performing dynamic contrast-enhanced MRI and using pharmacokinetic parameters, particularly K(trans) and k(ep), for analysis. These results are comparable to published results at 1.5 T.
Purpose To develop a 16-channel transceive body imaging array at 7.0T with improved transmit, receive and SAR performance by combining both loop and dipole elements and utilizing their respective and complementary near and far field characteristics. Methods A 16-channel RF coil array consisting of eight loop-dipole blocks (16LD) was designed and constructed. Transmit and receive performance was quantitatively investigated in phantom and human model simulations, and experiments on five healthy volunteers inside the prostate. Comparisons were made with 16-channel microstrip-line (16ML) and 10-channel fractionated dipole antenna (10DA) arrays. The 16LD was used to acquire anatomic and functional images of the prostate, kidneys and heart. Results The 16LD provided >14% improvements in SNR, peak B1+, B1+ transmit and SAR efficiencies over the 16ML and 10DA in simulations inside the prostate. Experimentally, the 16LD had >20% higher SNR and B1+ transmit efficiency compared to other arrays, and achieved up to 51.8% higher peak B1+ compared to 10DA. Conclusion Combining loop and dipole elements provided a body imaging array with high channel count and density while limiting inter-element coupling. The 16LD improved both near and far field performance compared to existing 7.0T body arrays and provided high quality MRI of the prostate kidneys and heart.
This work reports preliminary results from the first human cardiac imaging at 7 Tesla (T). Images were acquired using an eightchannel transmission line (TEM) array together with local B 1 shimming. The TEM array consisted of anterior and posterior plates closely positioned to the subjects' thorax. The currents in the independent elements of these arrays were phased to promote constructive interference of the complex, short wavelength radio frequency field over the entire heart. Anatomic and functional images were acquired within a single breath hold to reduce respiratory motion artifacts while a vector cardiogram (VCG) was used to mitigate cardiac motion artifacts and gating. SAR exposure was modeled, monitored, and was limited to FDA guidelines for the human torso in subject studies. Preliminary results including short-axis and four-chamber VCG-retrogated FLASH cines, as well as, short-axis TSE images demonstrate the feasibility of safe and accurate human cardiac imaging at 7T. Magn Reson Med 61:517-524, 2009.
Purpose To explore the potential of performing body imaging at 10.5T compared to 7.0T through evaluating the transmit/receive performance of similarly configured dipole antenna arrays. Methods Fractionated dipole antenna elements for 10.5T body imaging were designed and evaluated using numerical simulations. Transmit performance of antenna arrays inside the prostate, kidneys and heart were investigated and compared to those at 7.0T using both phase-only RF shimming and multi-spoke pulses. Signal-to-noise ratio (SNR) comparisons were also performed. A 10-channel antenna array was constructed to image the abdomen of a swine at 10.5T. Numerical methods were validated with phantom studies at both field strengths. Results Similar power efficiencies were observed inside target organs with phase-only shimming, but RF non-uniformity was significantly higher at 10.5T. Spokes RF pulses allowed similar transmit performance with accompanying local SAR increases of 25–90% compared to 7.0T. Relative SNR gains inside the target anatomies were calculated to be >2-fold higher at 10.5T, and 2.2-fold SNR gain was measured in a phantom. Gradient echo and fast spin echo imaging demonstrated the feasibility of body imaging at 10.5T with the designed array. Conclusion While comparable power efficiencies can be achieved using dipole antenna arrays with static shimming at 10.5T; increasing RF non-uniformities underscore the need for efficient, robust and safe parallel transmission methods.
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