This paper discusses the advantages and disadvantages of the different methods that separate net ecosystem exchange (NEE) into its major components, gross ecosystem carbon uptake (GEP) and ecosystem respiration (R-eco). In particular, we analyse the effect of the extrapolation of night-time values of ecosystem respiration into the daytime; this is usually done with a temperature response function that is derived from long-term data sets. For this analysis, we used 16 one-year-long data sets of carbon dioxide exchange measurements from European and US-American eddy covariance networks. These sites span from the boreal to Mediterranean climates, and include deciduous and evergreen forest, scrubland and crop ecosystems. long-term (annual) data sets, does not reflect the short-term temperature sensitivity that is effective when extrapolating from night- to daytime. Specifically, in summer active ecosystems the long-term temperature sensitivity exceeds the short-term sensitivity. Thus, in those ecosystems, the application of a long-term temperature sensitivity to the extrapolation of respiration from night to day leads to a systematic overestimation of ecosystem respiration from half-hourly to annual time-scales, which can reach > 25% for an annual budget and which consequently affects estimates of GEP. Conversely, in summer passive (Mediterranean) ecosystems, the long-term temperature sensitivity is lower than the short-term temperature sensitivity resulting in underestimation of annual sums of respiration. temperature sensitivity of R-eco from eddy covariance data that applies this to the extrapolation from night- to daytime, and that further performs a filling of data gaps that exploits both, the covariance between fluxes and meteorological drivers and the temporal structure of the fluxes. While this algorithm should give less biased estimates of GEP and R-eco, we discuss the remaining biases and recommend that eddy covariance measurements are still backed by ancillary flux measurements that can reduce the uncertainties inherent in the eddy covariance data. [References: 53

Future climate warming is expected to enhance plant growth in temperate ecosystems and to increase carbon sequestration. But although severe regional heatwaves may become more frequent in a changing climate, their impact on terrestrial carbon cycling is unclear. Here we report measurements of ecosystem carbon dioxide fluxes, remotely sensed radiation absorbed by plants, and country-level crop yields taken during the European heatwave in 2003. We use a terrestrial biosphere simulation model to assess continental-scale changes in primary productivity during 2003, and their consequences for the net carbon balance. We estimate a 30 per cent reduction in gross primary productivity over Europe, which resulted in a strong anomalous net source of carbon dioxide (0.5 Pg C yr(-1)) to the atmosphere and reversed the effect of four years of net ecosystem carbon sequestration. Our results suggest that productivity reduction in eastern and western Europe can be explained by rainfall deficit and extreme summer heat, respectively. We also find that ecosystem respiration decreased together with gross primary productivity, rather than accelerating with the temperature rise. Model results, corroborated by historical records of crop yields, suggest that such a reduction in Europe's primary productivity is unprecedented during the last century. An increase in future drought events could turn temperate ecosystems into carbon sources, contributing to positive carbon-climate feedbacks already anticipated in the tropics and at high latitudes.

The use of fossil fuels and fertilizers has increased the amount of biologically reactive nitrogen in the atmosphere over the past century. As a consequence, forests in industrialized regions have experienced greater rates of nitrogen deposition in recent decades. This unintended fertilization has stimulated forest growth, but has also affected soil microbial activity, and thus the recycling of soil carbon and nutrients. A meta-analysis suggests that nitrogen deposition impedes organic matter decomposition, and thus stimulates carbon sequestration, in temperate forest soils where nitrogen is not limiting microbial growth. The concomitant reduction in soil carbon emissions is substantial, and equivalent in magnitude to the amount of carbon taken up by trees owing to nitrogen fertilization. As atmospheric nitrogen levels continue to rise, increased nitrogen deposition could spread to older, more weathered soils, as found in the tropics; however, soil carbon cycling in tropical forests cannot yet be assessed

Carbon exchange between the terrestrial biosphere and the atmosphere is one of the key processes that need to be assessed in the context of the Kyoto Protocol. Several studies suggest that the terrestrial biosphere is gaining carbon, but these estimates are obtained primarily by indirect methods, and the factors that control terrestrial carbon exchange, its magnitude and primary locations, are under debate. Here we present data of net ecosystem carbon exchange, collected between 1996 and 1998 from 15 European forests, which confirm that many European forest ecosystems act as carbon sinks. The annual carbon balances range from an uptake of 6.6 tonnes of carbon per hectare per year to a release of nearly 1 t C ha(-1) yr(-1), with a large variability between forests. The data show a significant increase of carbon uptake with decreasing latitude, whereas the gross primary production seems to be largely independent of latitude. Our observations indicate that, in general, ecosystem respiration determines net ecosystem carbon exchange. Also, for an accurate assessment of the carbon balance in a particular forest ecosystem, remote sensing of the normalized difference vegetation index or estimates based on forest inventories may not be sufficient.

Terrestrial ecosystems sequester 2.1 Pg of atmospheric carbon annually. A large amount of the terrestrial sink is realized by forests. However, considerable uncertainties remain regarding the fate of this carbon over both short and long timescales. Relevant data to address these uncertainties are being collected at many sites around the world, but syntheses of these data are still sparse. To facilitate future synthesis activities, we have assembled a comprehensive global database for forest ecosystems, which includes carbon budget variables (fluxes and stocks), ecosystem traits (e.g. leaf area index, age), as well as ancillary site information such as management regime, climate, and soil characteristics. This publicly available database can be used to quantify global, regional or biome-specific carbon budgets; to re-examine established relationships; to test emerging hypotheses about ecosystem functioning [e.g. a constant net ecosystem production (NEP) to gross primary production (GPP) ratio]; and as benchmarks for model evaluations. In this paper, we present the first analysis of this database. We discuss the climatic influences on GPP, net primary production (NPP) and NEP and present the CO 2 balances for boreal, temperate, and tropical forest biomes based on micrometeorological, ecophysiological, and biometric flux and inventory estimates. Globally, GPP of forests benefited from higher temperatures and precipitation whereas NPP saturated above either a threshold of 1500 mm precipitation or a mean annual temperature of 10 1C. The global pattern in NEP was insensitive to climate and is hypothesized to be mainly determined by nonclimatic conditions such as successional stage, management, site history, and site disturbance. In all biomes, closing the CO 2 balance required the introduction of substantial biome-specific closure terms. Nonclosure was taken as an indication that respiratory processes, advection, and non-CO 2 carbon fluxes are not presently being adequately accounted for. Nomenclauture:DOC 5 dissolved organic carbon; fNPP 5 foliage component of NPP; GPP 5 gross primary production (GPP40 denotes photosynthetic uptake); mNPP 5 missing component of NPP;NBP 5 net biome production (NBP40 denotes biome uptake); NECB 5 net ecosystem carbon balance (NECB40 denotes ecosystem uptake); NEE 5 net ecosystem exchange (NEE40 denotes ecosystem uptake); NEP 5 net ecosystem production (NEP40 denotes ecosystem uptake); NPP 5 net primary production (NPP40 denotes ecosystem uptake); R a 5 autotrophic respiration (R a 40 denotes respiratory losses); R e 5 ecosystem respiration (R e 40 denotes respiratory losses); R h 5 heterotrophic respiration (R h 40 denotes respiratory losses); rNPP 5 root component of NPP;R s 5 soil respiration (R s 40 denotes respiratory losses); VOC 5 volatile organic compounds; wNPP 5 wood component of NPP

Bakwin, P.; Berbigier, P.; Davis, K.; Dolman, A. J.; Falk, M.; Fuentes, J. D.; Goldstein, A.; Granier, A.; Grelle, A.; Hollinger, D.; Janssens, I. A.; Jarvis, P.; Jensen, N. O.; Katul, G.; Mahli, K.; Matteucci, G.; Meyers, T.; Monson, R.; Munger, W.; Oechel, W.; Olson, R.; Pilegaard, K.; Paw U, K. T.; Thorgeirsson, H.; Valentini, R.; Verma, Shashi; Vesala, T.; Wilson, K.; and Wofsy, S., "Environmental controls over carbon dioxide and water vapor exchange of terrestrial vegetation" (2002 B.E. Law et al. / Agricultural and Forest Meteorology 113 (2002) 97-120 AbstractThe objective of this research was to compare seasonal and annual estimates of CO 2 and water vapor exchange across sites in forests, grasslands, crops, and tundra that are part of an international network called FLUXNET, and to investigating the responses of vegetation to environmental variables. FLUXNETs goals are to understand the mechanisms controlling the exchanges of CO 2 , water vapor and energy across a spectrum of time and space scales, and to provide information for modeling of carbon and water cycling across regions and the globe. At a subset of sites, net carbon uptake (net ecosystem exchange, the net of photosynthesis and respiration) was greater under diffuse than under direct radiation conditions, perhaps because of a more efficient distribution of non-saturating light conditions for photosynthesis, lower vapor pressure deficit limitation to photosynthesis, and lower respiration associated with reduced temperature. The slope of the relation between monthly gross ecosystem production and evapotranspiration was similar between biomes, except for tundra vegetation, showing a strong linkage between carbon gain and water loss integrated over the year (slopes = 3.4 g CO 2 /kg H 2 O for grasslands, 3.2 for deciduous broadleaf forests, 3.1 for crops, 2.4 for evergreen conifers, and 1.5 for tundra vegetation). The ratio of annual ecosystem respiration to gross photosynthesis averaged 0.83, with lower values for grasslands, presumably because of less investment in respiring plant tissue compared with forests. Ecosystem respiration was weakly correlated with mean annual temperature across biomes, in spite of within site sensitivity over shorter temporal scales. Mean annual temperature and site water balance explained much of the variation in gross photosynthesis. Water availability limits leaf area index over the long-term, and inter-annual climate variability can limit carbon uptake below the potential of the leaf area present.

Summary This paper presents CO2 flux data from 18 forest ecosystems, studied in the European Union funded EUROFLUX project. Overall, mean annual gross primary productivity (GPP, the total amount of carbon (C) fixed during photosynthesis) of these forests was 1380 ± 330 gC m−2 y−1 (mean ±SD). On average, 80% of GPP was respired by autotrophs and heterotrophs and released back into the atmosphere (total ecosystem respiration, TER = 1100 ± 260 gC m−2 y−1). Mean annual soil respiration (SR) was 760 ± 340 gC m−2 y−1 (55% of GPP and 69% of TER). Among the investigated forests, large differences were observed in annual SR and TER that were not correlated with mean annual temperature. However, a significant correlation was observed between annual SR and TER and GPP among the relatively undisturbed forests. On the assumption that (i) root respiration is constrained by the allocation of photosynthates to the roots, which is coupled to productivity, and that (ii) the largest fraction of heterotrophic soil respiration originates from decomposition of young organic matter (leaves, fine roots), whose availability also depends on primary productivity, it is hypothesized that differences in SR among forests are likely to depend more on productivity than on temperature. At sites where soil disturbance has occurred (e.g. ploughing, drainage), soil espiration was a larger component of the ecosystem C budget and deviated from the relationship between annual SR (and TER) and GPP observed among the less‐disturbed forests. At one particular forest, carbon losses from the soil were so large, that in some years the site became a net source of carbon to the atmosphere. Excluding the disturbed sites from the present analysis reduced mean SR to 660 ± 290 gC m−2 y−1, representing 49% of GPP and 63% of TER in the relatively undisturbed forest ecosystems.

The European CARBOEUROPE/FLUXNET monitoring sites, spatial remote sensing observations via the EOS-MODIS sensor and ecosystem modelling provide independent and complementary views on the effect of the 2003 heatwave on the European biosphere's productivity and carbon balance. In our analysis, these data streams consistently demonstrate a strong negative anomaly of the primary productivity during the summer of 2003. FLUXNET eddy-covariance data indicate that the drop in productivity was not primarily caused by high temperatures ('heat stress') but rather by limitation of water (drought stress) and that, contrary to the classical expectation about a heat wave, not only gross primary productivity but also ecosystem respiration declined by up to more than to 80 gC m(-2) month(-1). Anomalies of carbon and water fluxes were strongly correlated. While there are large between-site differences in water-use efficiency (WUE, 1-6 kg C kg(-1) H₂O) here defined as gross carbon uptake divided by evapotranspiration (WUE=GPP/ET), the year-to-year changes in WUE were small (< 1 g kg(-1)) and quite similar for most sites (i.e. WUE decreased during the year of the heatwave). Remote sensing data from MODIS and AVHRR both indicate a strong negative anomaly of the fraction of absorbed photosynthetically active radiation in summer 2003, at more than five standard deviations of the previous years. The spatial differentiation of this anomaly follows climatic and land-use patterns: Largest anomalies occur in the centre of the meteorological anomaly (central Western Europe) and in areas dominated by crops or grassland. A preliminary model intercomparison along a gradient from data-oriented models to process-oriented models indicates that all approaches are similarly describing the spatial pattern of ecosystem sensitivity to the climatic 2003 event with major exceptions in the Alps and parts of Eastern Europe, but differed with respect to their interannual variability. [References: 46