Background With enough advanced notice, dengue outbreaks can be mitigated. As a climate-sensitive disease, environmental conditions and past patterns of dengue can be used to make predictions about future outbreak risk. These predictions improve public health planning and decision-making to ultimately reduce the burden of disease. Past approaches to dengue forecasting have used seasonal climate forecasts, but the predictive ability of a system using different lead times in a year-round prediction system has been seldom explored. Moreover, the transition from theoretical to operational systems integrated with disease control activities is rare. Methods and findings We introduce an operational seasonal dengue forecasting system for Vietnam where Earth observations, seasonal climate forecasts, and lagged dengue cases are used to drive a superensemble of probabilistic dengue models to predict dengue risk up to 6 months ahead. Bayesian spatiotemporal models were fit to 19 years (2002–2020) of dengue data at the province level across Vietnam. A superensemble of these models then makes probabilistic predictions of dengue incidence at various future time points aligned with key Vietnamese decision and planning deadlines. We demonstrate that the superensemble generates more accurate predictions of dengue incidence than the individual models it incorporates across a suite of time horizons and transmission settings. Using historical data, the superensemble made slightly more accurate predictions (continuous rank probability score [CRPS] = 66.8, 95% CI 60.6–148.0) than a baseline model which forecasts the same incidence rate every month (CRPS = 79.4, 95% CI 78.5–80.5) at lead times of 1 to 3 months, albeit with larger uncertainty. The outbreak detection capability of the superensemble was considerably larger (69%) than that of the baseline model (54.5%). Predictions were most accurate in southern Vietnam, an area that experiences semi-regular seasonal dengue transmission. The system also demonstrated added value across multiple areas compared to previous practice of not using a forecast. We use the system to make a prospective prediction for dengue incidence in Vietnam for the period May to October 2020. Prospective predictions made with the superensemble were slightly more accurate (CRPS = 110, 95% CI 102–575) than those made with the baseline model (CRPS = 125, 95% CI 120–168) but had larger uncertainty. Finally, we propose a framework for the evaluation of probabilistic predictions. Despite the demonstrated value of our forecasting system, the approach is limited by the consistency of the dengue case data, as well as the lack of publicly available, continuous, and long-term data sets on mosquito control efforts and serotype-specific case data. Conclusions This study shows that by combining detailed Earth observation data, seasonal climate forecasts, and state-of-the-art models, dengue outbreaks can be predicted across a broad range of settings, with enough lead time to meaningfully inform dengue control. While our system omits some important variables not currently available at a subnational scale, the majority of past outbreaks could be predicted up to 3 months ahead. Over the next 2 years, the system will be prospectively evaluated and, if successful, potentially extended to other areas and other climate-sensitive disease systems.
The green revolution represents one of the greatest environmental changes in India over the last century. The Upper Ganges (UG) basin is experiencing rapid rates of change of land cover and irrigation practices. In this study, we investigated the historical rate of change and created future scenario projections by means of 30 m-resolution multitemporal Landsat 5 Thematic Mapper and Landsat 7 Enhanced Thematic Mapper Plus data of the UG basin. Post-classification change analysis methods were applied to Landsat images in order to detect and quantify land-cover changes in the UG basin. Subsequently, Markov chain analysis was applied to project future scenarios of land-cover change. Fifteen different scenarios were generated based on historic land-cover change. These scenarios diverged in terms of future projections, highlighting the dynamic nature of the changes. This study has shown that between the years 1984 and 2010 the main land-cover change trends are conversion from shrubs to forest (+4.7%), urbanization (+5.8%), agricultural expansion (+1.3%), and loss of barren land (-9.5%). The land-cover change patterns in the UG basin were mapped and quantified, showing the capability of Landsat data in providing accurate land-cover maps. These results, in combination with those derived from the Markov model, provide the necessary evidence base to support regional land-use planning and develop future-proof water resource management strategies.
Abstract. Land-Surface Models (LSMs) are tools that represent energy and water flux exchanges between land and the atmosphere. Although much progress has been made in adding detailed physical processes into these models, there is much room left for improved estimates of evapotranspiration fluxes, by including a more reasonable and accurate representation of crop dynamics. Recent studies suggest a strong land-surface-atmosphere coupling over India and since this is one of the most intensively cultivated areas in the world, the strong impact of crops on the evaporative flux cannot be neglected. In this study we dynamically couple the LSM JULES with the crop growth model InfoCrop. JULES in its current version (v3.4) does not simulate crop growth. Instead, it treats crops as natural grass, while using prescribed vegetation parameters. Such simplification might lead to modelling errors. Therefore we developed a coupled modelling scheme that simulates dynamically crop development and parametrized it for the two main crops of the study area, wheat and rice. This setup is used to examine the impact of inter-seasonal land cover changes in evapotranspiration fluxes of the Upper Ganges River basin (India). The sensitivity of JULES with regard to the dynamics of the vegetation cover is evaluated. Our results show that the model is sensitive to the changes introduced after coupling it with the crop model. Evapotranspiration fluxes, which are significantly different between the original and the coupled model, are giving an approximation of the magnitude of error to be expected in LSMs that do not include dynamic crop growth. For the wet season, in the original model, the monthly Mean Error ranges from 7.5 to 24.4 mm month −1 , depending on different precipitation forcing. For the same season, in the coupled model, the monthly Mean Error's range is reduced to 5.4-11.6 mm month −1 . For the dry season, in the original model, the monthly Mean Error ranges from 10 to 17 mm month −1 , depending on different precipitation forcing. For the same season, in the coupled model, the monthly Mean Error's range is reduced to 2.2-3.4 mm month −1 . The new modelling scheme, by offering increased accuracy of evapotranspiration estimations, is an important step towards a better understanding of the two-way crops-atmosphere interactions.
Dengue is a vector-borne disease affected by meteorological factors and is commonly recorded from ground stations. Data from ground station have limited spatial representation and accuracy, which can be overcome using satellite-based Earth Observation (EO) recordings instead. EO-based meteorological recordings can help to provide a better understanding of the correlations between meteorological variables and dengue cases. This paper aimed to first validate the satellite-based (EO) data of temperature, wind speed, and rainfall using ground station data. Subsequently, we aimed to determine if the spatially matched EO data correlated with dengue fever cases from 2011 to 2019 in Malaysia. EO data were spatially matched with the data from four ground stations located at states and districts in the central (Selangor, Petaling) and east coast (Kelantan, Kota Baharu) geographical regions of Peninsular Malaysia. Spearman’s rank-order correlation coefficient (ρ) was performed to examine the correlation between EO and ground station data. A cross-correlation analysis with an eight-week lag period was performed to examine the magnitude of correlation between EO data and dengue case across the three time periods (2011–2019, 2015–2019, 2011–2014). The highest correlation between the ground-based stations and corresponding EO data were reported for temperature (mean ρ = 0.779), followed by rainfall (mean ρ = 0.687) and wind speed (mean ρ = 0.639). Overall, positive correlations were observed between weekly dengue cases and rainfall for Selangor and Petaling across all time periods with significant correlations being observed for the period from 2011 to 2019 and 2015 to 2019. In addition, positive significant correlations were also observed between weekly dengue cases and temperature for Kelantan and Kota Baharu across all time periods, while negative significant correlations between weekly dengue cases and temperature were observed in Selangor and Petaling across all time periods. Overall negative correlations were observed between weekly dengue cases and wind speed in all areas from 2011 to 2019 and 2015 to 2019, with significant correlations being observed for the period from 2015 to 2019. EO-derived meteorological variables explained 48.2% of the variation in dengue cases in Selangor. Moderate to strong correlations were observed between meteorological variables recorded from EO data derived from satellites and ground stations, thereby justifying the use of EO data as a viable alternative to ground stations for recording meteorological variables. Both rainfall and temperature were found to be positively correlated with weekly dengue cases; however, wind speed was negatively correlated with dengue cases.
Purpose of review The purpose of this review is to summarize research articles that provide risk estimates for the historical and future impact that climate change has had upon dengue published from 2007 through 2019. Recent findings Findings from 30 studies on historical health estimates, with the majority of the studies conducted in Asia, emphasized the importance of temperature, precipitation, and relative humidity, as well as lag effects, when trying to understand how climate change can impact the risk of contracting dengue. Furthermore, 35 studies presented findings on future health risk based upon climate projection scenarios, with a third of them showcasing global level estimates and findings across the articles emphasizing the need to understand risk at a localized level as the impacts from climate change will be experienced inequitably across different geographies in the future. Summary Dengue is one of the most rapidly spreading viral diseases in the world, with ~390 million people infected worldwide annually. Several factors have contributed towards its proliferation, including climate change. Multiple studies have previously been conducted examining the relationship between dengue and climate change, both from a historical and a future risk perspective. We searched the U.S. National Institute of Environmental Health (NIEHS) Climate Change and Health Portal for literature (spanning January 2007 to September 2019) providing historical and future health risk estimates of contracting dengue infection in relation to climate variables worldwide. With an overview of the evidence of the historical and future health risk posed by dengue from climate change across different regions of the world, this review article enables the research and policy community to understand where the knowledge gaps are and what areas need to be addressed in order to implement localized adaptation measures to mitigate the health risks posed by future dengue infection.
Abstract. Quantifying how land-use change and climate change affect water resources is a challenge in hydrological science. This work aims to quantify how future projections of land-use and climate change might affect the hydrological response of the Upper Ganges river basin in northern India, which experiences monsoon flooding almost every year. Three different sets of modelling experiments were run using the Joint UK Land Environment Simulator (JULES) land surface model (LSM) and covering the period 2000–2035: in the first set, only climate change is taken into account, and JULES was driven by the CMIP5 (Coupled Model Intercomparison Project Phase 5) outputs of 21 models, under two representative concentration pathways (RCP4.5 and RCP8.5), whilst land use was held fixed at the year 2010. In the second set, only land-use change is taken into account, and JULES was driven by a time series of 15 future land-use pathways, based on Landsat satellite imagery and the Markov chain simulation, whilst the meteorological boundary conditions were held fixed at years 2000–2005. In the third set, both climate change and land-use change were taken into consideration, as the CMIP5 model outputs were used in conjunction with the 15 future land-use pathways to force JULES. Variations in hydrological variables (stream flow, evapotranspiration and soil moisture) are calculated during the simulation period. Significant changes in the near-future (years 2030–2035) hydrologic fluxes arise under future land-cover and climate change scenarios pointing towards a severe increase in high extremes of flow: the multi-model mean of the 95th percentile of streamflow (Q5) is projected to increase by 63 % under the combined land-use and climate change high emissions scenario (RCP8.5). The changes in all examined hydrological components are greater in the combined land-use and climate change experiment. Results are further presented in a water resources context, aiming to address potential implications of climate change and land-use change from a water demand perspective. We conclude that future water demands in the Upper Ganges region for winter months may not be met.
Timely information is key for decision-making. The ability to predict dengue transmission ahead of time would significantly benefit planners and decision-makers. Dengue is climate-sensitive. Monitoring climate variability could provide advance warning about dengue risk. Multiple dengue early warning systems have been proposed. Often, these systems are based on deterministic models that have limitations for quantifying the probability that a public health event may occur. We introduce an operational seasonal dengue forecasting system where Earth observations and seasonal climate forecasts are used to drive a superensemble of probabilistic dengue models to predict dengue risk up to six months ahead. We demonstrate that the system has skill and relative economic value at multiple forecast horizons, seasons, and locations. The superensemble generated, on average, more accurate forecasts than those obtained from the models used to create it. We argue our system provides a useful tool for the development and deployment of targeted vector control interventions, and a more efficient allocation of resources in Vietnam.
<p>Dengue fever is now present in over 150 countries world-wide, affecting 390 million people per year. In Vietnam the number of cases has increased by 100% since 2000, and 2019 exhibited exceptional high numbers of reported dengue fever cases. Transmission of this mosquito-borne disease is dependent on a variety of climate and socio-economic factors. Among those water availability plays a crucial role in creating or destroying suitable mosquito breeding grounds.</p><p>At present mitigating actions are taken based on reported dengue fever cases and local knowledge, leading to a reactive rather than proactive approach of disease control. By combining Earth Observation and vector-borne disease modelling expertise we have developed D-MOSS (Dengue Model Forecasting Satellite based System). The D-MOSS system is funded by the UK Space Agency&#8217;s International Partnership Programme and aims to predict the likelihood of future dengue epidemics for Vietnam on a province scale with a lead time of up to six months.</p><p>D-MOSS integrates multiple stressors such as water availability, land-cover, precipitation and temperature with data of past dengue fever incidents.&#160; This information is used to develop statistical models of disease incidence, that can then be used to forecast dengue outbreaks based on seasonal weather and hydrological forecasts.&#160; It is the first fully integrated dengue fever forecasting system incorporating Earth Observation data and seasonal climate forecasts to routinely issue warnings.&#160;</p><p>D-MOSS takes the form of a web-based platform.&#160; The system&#8217;s architecture is based on open and non-proprietary software, where possible, and on flexible deployment into platforms including cloud-based virtual storage and application processing. Working closely with public health authorities in Vietnam enabled us to develop a system tailored to the local needs and decision making procedures.</p>
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