Phylogenetic relationships among the four major lineages of land plants (liverworts, mosses, hornworts, and vascular plants) remain vigorously contested; their resolution is essential to our understanding of the origin and early evolution of land plants. We analyzed three different complementary data sets: a multigene supermatrix, a genomic structural character matrix, and a chloroplast genome sequence matrix, using maximum likelihood, maximum parsimony, and compatibility methods. Analyses of all three data sets strongly supported liverworts as the sister to all other land plants, and analyses of the multigene and chloroplast genome matrices provided moderate to strong support for hornworts as the sister to vascular plants. These results highlight the important roles of liverworts and hornworts in two major events of plant evolution: the water-to-land transition and the change from a haploid gametophyte generation-dominant life cycle in bryophytes to a diploid sporophyte generation-dominant life cycle in vascular plants. This study also demonstrates the importance of using a multifaceted approach to resolve difficult nodes in the tree of life. In particular, it is shown here that densely sampled taxon trees built with multiple genes provide an indispensable test of taxon-sparse trees inferred from genome sequences.alternation of generations ͉ hornworts ͉ liverworts ͉ phylogeny ͉ taxon sampling T he origin and early evolution of land plants (embryophytes) during the mid-Ordovician to lower Silurian (480-430 million years ago) initiated the establishment of the modern terrestrial ecosystems and fundamentally altered the course of evolution of life on earth. Two important events marked this period of unprecedented innovation in plant evolution: the massive colonization of the land by plants descended from charophyte algae and the change of the dominant generation in the plant life cycle from a haploid gametophyte to a diploid sporophyte (1-5). The first event opened a vastly underexplored niche of high-intensity solar radiation and abundant CO 2 to photosynthetic life. The second event conferred on plants two abilities to adapt to a life in a water-deficient and UV-abundant terrestrial environment. One is the ability to produce a large number of genetically diverse gametes to ensure fertilization on land where sperm locomotion is hindered, and the other is the ability to mask deleterious mutations through the dominantrecessive interaction of alleles, thus allowing a large number of alleles to persist in the gene pool (2-4). Our understanding of these events hinges on our knowledge of relationships between the organisms involved in these major evolutionary transitions. Despite numerous studies using diverse approaches analyzing morphological and͞or molecular characters, relationships among early land plants remain controversial (5-19). Fossil evidence, although increasingly improved, has not helped to resolve the issues decisively (20,21).A multitude of phenomena characterizing diversification of many major clades o...

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The acetabular region is often present and adequately preserved in adult human skeletal remains. Close morphological examination of the 242 left male os coxae from the identified collection of Coimbra (Portugal) has enabled the recognition of seven variables that can be used to estimate age at death. This paper describes these variables and argues their appropriateness by analyzing the correlation between these criteria and the age, the intra- and interobserver consistence, and the accuracy in age prediction using Bayesian inference to estimate age of identified specimens. Results show significant close correlation between the acetabular criteria and age, nonsignificant differences in intra- and interobserver test, and 89% accuracy in Bayes prediction. Obtained estimated age of the specimens had similar accuracy in all ages. These results indicate that these seven variables, based on the acetabular area, are potentially useful to estimate age at death for adult specimens.

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Aim To investigate the distribution of local flowering plant species richness in areas surrounding American universities.Methods Species richness in university counties was compared with neighbouring counties. Data were derived from Synthesis of the North American Flora (http://www.phylosystems.com/prepublication). Probabilities of the resultant distribution were calculated, and the results were also simulated. ResultsIn almost every case there were more species reported in the university county than in its neighbours. Several possible explanations were considered. We conclude that the key element is the presence of botanists in these counties who have, apparently, paid more attention to plants near at hand, and found more species of them there.Main conclusions Ecologists must be aware that numerical data that appear very solid, collected over many decades, may represent not only the qualities of 'nature' but also something of the collectors of the data.

Methods to estimate adult age from observations of skeletal elements are not very accurate and motivate the development of better methods. In this article, we test recently published method based on the acetabulum and Bayesian inference, developed using Coimbra collection (Portugal). In this study, to evaluate its utility in other populations, this methodology was applied to 394 specimens from four different documented Western European collections. Four strategies of analysis to estimate age were outlined: (a) each series separately; (b) on Lisbon collection, taken as a reference Coimbra collection; (c) on Barcelona collection, taken as a reference both Portuguese collections; and (d) on London collection taken as reference the three Iberian collections combined. Results indicate that estimates are accurate (83-100%). As might be expected, the least accurate estimates were obtained when the most distant collection was used as a reference. Observations of the fused acetabulum can be used to make accurate estimates of age for adults of any age, with less accurate estimates when a more distant reference collection is used.

Estimating evolutionary relationships is basic to the objectives of systematics. Comparative data, structured as taxonomic characters, are usually the esssential considerations on which such estimates are founded. Some taxonomic characters are more useful than others for structuring plausible estimates of evolutionary relationship. Thus, one of the primary challenges to the systematist is the construction of taxonomic characters most useful for this purpose. Since taxonomic characters are the result of action on the part of the systematist, they must be defined operationally. It is our hope, however, that these operationally defined characters will conform to an ideal that, itself, cannot be operationally defined insofar as the concept depends on history that is, usually, inherently unknowable. It is, nonetheless, essential to our conceptual methods that this ideal concept be well defined. Here we present a series of definitions leading to a clear ideal concept of irue cladistic character. This series includes definitions of the concepts: evolutionary unit, qualitative taxonomic character, monophyletic group, divergent character, true cladistic character, operational cladistic character, and the post-factum ideal relation between an operational cladistic character and an estimate of cladistic history. A concise characterization of true cladistic character is presented and proved.

Using formal algebraic definitions of "cladistic character" and "character compatibility", the concept of "binary factors of a cladistic character" is formalized and used to describe and justify an algorithm for checking the compatibility of a set of characters. The algorithm lends itself to the selection of maximal compatible subsets when compatibility fails.