Simultaneous analysis of oligomer and fibril assembly kinetics reveals inhibitory effects of metastable oligomers on amyloid fibril formation.

The mechanisms linking deposits of insoluble amyloid fibrils to the debilitating neuronal cell death characteristic of neurodegenerative diseases remain enigmatic. Recent findings implicate transiently formed intermediates of mature amyloid fibrils as the principal toxic agent. Hence, determining which intermediate aggregates represent on-pathway precursors or off-pathway side branches is critical for understanding amyloid self-assembly, and for devising therapeutic approaches targeting relevant toxic species. We examined amyloid fibril self-assembly in acidic solutions, using the model protein hen egg-white lysozyme. Combining in situ dynamic light scattering with calibrated atomic-force microscopy, we monitored the nucleation and growth kinetics of multiple transient aggregate species, and characterized both their morphologies and physical dimensions. Upon incubation at elevated temperatures, uniformly sized oligomers formed at a constant rate. After a lag period of several hours, protofibrils spontaneously nucleated. The nucleation kinetics of protofibrils and the tight match of their widths and heights with those of oligomers imply that protofibrils both nucleated and grew via oligomer fusion. After reaching several hundred nanometers in length, protofibrils assembled into mature fibrils. Overall, the amyloid fibril assembly of lysozyme followed a strict hierarchical aggregation pathway, with amyloid monomers, oligomers, and protofibrils forming on-pathway intermediates for assembly into successively more complex structures.

Micrometer-scale poly(N-isopropylacrylamide) (poly-NIPAAm) hydrogel monolith patterns were fabricated on solid surfaces using soft lithography. At sufficiently high aspect ratios, the hydrogel monoliths swell and contract laterally with temperature. The spaces between the monoliths form a series of trenches that catch, hold, and release appropriately sized targets. A series of poly-NIPAAm monoliths were fabricated with dry dimensions of 40 microm height, 12 microm diameter, and a spacing of 12 microm between monoliths. Above the lower critical solution temperature (LCST), the monoliths collapse to their dry dimensions and the spacing between monoliths is 12 microm. Below the LCST, the monoliths swell by 70% in the lateral direction, reducing the gap size between monoliths to 3 microm. The potential use of the hydrogel monoliths as size-selective "catch and release" structures was demonstrated with a mixture of 6 and 20 microm polystyrene microspheres, where the 6 microm diameter particles were selectively concentrated and separated from the larger particles.