A large number of uncertain problems existing in rural drinking water safety system, it is of great significances to apply Set Pair Analysis(SPA) theory to analyze and study these uncertain problems in rural drinking water safety system. This study applies SPA theory to conduct an integrated evaluation of water quality to rural drinking water safety in Ya'an City, based on classification values of Sanitary Standard for Drinking Water(GB5749-85). This study has worked efficiently in practice. Compared with the same kind of methods which have been found, this paper has the outstanding results for the uncertain problems of health risk assessment of the rural drinking water safety.
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