Antibiotics with new mechanisms of action are urgently required to combat the growing health threat posed by resistant pathogenic microorganisms. We synthesized a family of peptidomimetic antibiotics, based on the antimicrobial peptide protegrin I. Several rounds of optimization gave a lead compound that was active in the nanomolar range against gram-negative Pseudomonas sp., but was largely inactive against other Gram-negative and Gram-positive bacteria. Biochemical and genetic studies showed the peptidomimetics had a non-membrane-lytic mechanism of action and identified a homologue of the ß-barrel protein LptD (Imp/OstA), which functions in outer membrane biogenesis, as a cellular target. The peptidomimetic showed potent antimicrobial activity in a mouse septicemia infection model. Drug-resistant strains of Pseudomonas are a serious health problem, so this family of antibiotics may have important therapeutic applications. A synthesized antibiotic targets a protein involved in outer membrane biogenesis to selectively kill Pseudomonas pathogens.
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Peptidomimetic Antibiotics Target Outer Membrane Biogenesis in
Pseudomonas aeruginosa
AbstractAntibiotics with new mechanisms of action are urgently required to combat the growing health
Signal transducers and activators of transcription (STAT) 1 and STAT3 are activated by overlapping but distinct sets of cytokines. STATs are recruited to the different cytokine receptors through their Src homology (SH) 2 domains that make highly specific interactions with phosphotyrosine-docking sites on the receptors. We used a degenerate phosphopeptide library synthesized on 35-m TentaGel beads and fluorescenceactivated bead sorting to determine the sequence specificity of the peptide-binding sites of the SH2 domains of STAT1 and STAT3. The large bead library allowed not only peptide sequencing of pools of beads but also of single beads. The method was validated through surface plasmon resonance measurements of the affinities of different peptides to the STAT SH2 domains. Furthermore, when selected peptides were attached to a truncated erythropoietin receptor and stably expressed in DA3 cells, activation of STAT1 or STAT3 could be achieved by stimulation with erythropoietin. The combined analysis of pool sequencing, the individual peptide sequences, and plasmon resonance measurements allowed the definition of SH2 domain binding motifs. STAT1 preferentially binds peptides with the motif phosphotyrosine-(aspartic acid/glutamic acid)-(proline/ arginine)-(arginine/proline/glutamine), whereby a negatively charged amino acid at ؉1 excludes a proline at ؉2 and vice versa. STAT3 preferentially binds peptides with the motif phosphotyrosine-(basic or hydrophobic)-(proline or basic)-glutamine. For both STAT1 and STAT3, specific high affinity phosphopeptides were identified that can be used for the design of inhibitory molecules.The signal transducers and activators of transcription (STATs) 1 constitute a family of latent cytoplasmic transcription factors that are activated by a large number of cytokines, growth factors, and hormones. The binding of these extracellular signaling polypeptides to specific cell surface receptors typically results in receptor homo-or heterodimerization and consecutive activation of receptor-associated protein tyrosine kinases of the Jak family. Activated Jak kinases phosphorylate tyrosine residues in the intracellular domains of the receptors (1). STATs then bind with their SH2 domains to these receptordocking sites. The Jak kinases phosphorylate the STATs on a single tyrosine located carboxyl-terminal to the SH2 domain (2). The tyrosine phosphorylation of STATs is the decisive activation event, resulting in STAT dimer formation through mutual SH2 domain-phosphotyrosine interactions. STAT dimers translocate into the nucleus, bind to response elements in gene promoters, and enhance the transcription of these target genes (3-5). Seven mammalian STAT genes have been identified in three chromosomal clusters (6). The different STAT proteins are activated by distinct cytokines and growth factors, and each STAT protein activates a distinct set of target genes (5, 7). The specific coupling of the different STAT family members to cytokine receptors is crucial for the generation of diverse intracellu...
We have studied the mechanism of action of Arg*-Arg-Nal 2 -Cys(1ϫ)-Tyr-Gln-Lys-(D-Pro)-Pro-Tyr-Arg-Cit-Cys(1ϫ)-ArgGly-(D-Pro)* (POL3026), a novel specific -hairpin mimetic CXC chemokine receptor (CXCR)4 antagonist. POL3026 specifically blocked the binding of anti-CXCR4 monoclonal antibody 12G5 and the intracellular Ca 2ϩ signal induced by CXC chemokine ligand 12. POL3026 consistently blocked the replication of human immunodeficiency virus (HIV), including a wide panel of X4 and dualtropic strains and subtypes in several culture models, with 50% effective concentrations (EC 50 ) at the subnanomolar range, making POL3026 the most potent CXCR4 antagonist described to date. However, 1- [[4-(1,4,8,11-tetrazacyclotetradec-1-ylmethyl
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