Heat stress during the seedling stage of early-planted winter wheat (Triticum aestivum L.) is one of the most abiotic stresses of the crop restricting forage and grain production in the Southern Plains of the United States. To map quantitative trait loci (QTLs) and identify single-nucleotide polymorphism (SNP) markers associated with seedling heat tolerance, a genome-wide association mapping study (GWAS) was conducted using 200 diverse representative lines of the hard red winter wheat association mapping panel, which was established by the Triticeae Coordinated Agricultural Project (TCAP) and genotyped with the wheat iSelect 90K SNP array. The plants were initially planted under optimal temperature conditions in two growth chambers. At the three-leaf stage, one chamber was set to 40/35°C day/night as heat stress treatment, while the other chamber was kept at optimal temperature (25/20°C day/night) as control for 14 days. Data were collected on leaf chlorophyll content, shoot length, number of leaves per seedling, and seedling recovery after removal of heat stress treatment. Phenotypic variability for seedling heat tolerance among wheat lines was observed in this study. Using the mixed linear model (MLM), we detected multiple significant QTLs for seedling heat tolerance on different chromosomes. Some of the QTLs were detected on chromosomes that were previously reported to harbor QTLs for heat tolerance during the flowering stage of wheat. These results suggest that some heat tolerance QTLs are effective from the seedling to reproductive stages in wheat. However, new QTLs that have never been reported at the reproductive stage were found responding to seedling heat stress in the present study. Candidate gene analysis revealed high sequence similarities of some significant loci with candidate genes involved in plant stress responses including heat, drought, and salt stress. This study provides valuable information about the genetic basis of seedling heat tolerance in wheat. To the best of our knowledge, this is the first GWAS to map QTLs associated with seedling heat tolerance targeting early planting of dual-purpose winter wheat. The SNP markers identified in this study will be used for marker-assisted selection (MAS) of seedling heat tolerance during dual-purpose wheat breeding.

Cold temperature is one of the major abiotic constraints to sorghum [Sorghum bicolor (L.) Moench] production in the United States. Though the effect on germination and establishment are well documented, the impact of the stress on adult plant traits is not known. The objectives of this study were to investigate the impact of cold temperature at two growth stages and identify genetic sources of tolerance for use in breeding programs. Three genotypes, Shan Qui Red (tolerant), SRN39 (susceptible), and Pioneer 84G62, were subjected to two temperature regimes, cold temperature [15°C (day) and 13°C (night)] and control temperature [25°C (day) and 23°C (night)], at seedling and flowering stages using growth chambers, and the stresses lasted 10 d. Another 136 accessions were evaluated in the field under cold and control temperatures imposed by varying planting dates. Data were collected on emergence, seedling growth parameters, phenology, and yield components. Early season cold stress reduced seedling vigor (3.4 vs. 1.2) and leaf chlorophyll content (28.83 vs. 36.59) and delayed flowering and maturity by 8 and 4 d, respectively, but had no effect on yield components and plant height. Stress at flowering stage delayed maturity by 9 d and significantly reduced all yield components. The effect of cold stress at seedling stage may not be critical to yield provided that emergence is not affected. Stress at flowering, however, may be detrimental and the effects seem irreversible.

Cold temperature is an important abiotic stress affecting sorghum production in temperate regions. It reduces seed germination, seedling emergence and seedling vigor thus limiting the production of the crop both temporally and spatially. The objectives of this study were (1) to assess early season cold temperature stress response of sorghum germplasm from cooler environments and identify sources of tolerance for use in breeding programs, (2) to determine population structure and marker-trait association among these germplasms for eventual development of marker tools for improving cold tolerance. A total of 136 sorghum accessions from cooler regions of the world were phenotyped for seedling growth characteristics under cold temperature imposed through early planting. The accessions were genotyped using 67 simple sequence repeats markers spanning all ten linkage groups of sorghum, of which 50 highly polymorphic markers were used in the analysis. Genetic diversity and population structure analyses sorted the population into four subpopulations. Several accessions distributed in all subpopulations showed either better or comparable level of tolerance to the standard cold tolerance source, Shan qui red. Association analysis between the markers and seedling traits identified markers Xtxp34, Xtxp88, and Xtxp319 as associated with seedling emergence, Xtxp211 and Xtxp304 with seedling dry weight, and Xtxp20 with seedling height. The markers were detected on chromosomes previously found to harbor QTLs associated with cold tolerance in sorghum. Once validated these may serve as genomic tools in marker-assisted breeding or for screening larger pool of genotypes to identify additional sources of cold tolerance.

In the southern Great Plains of the United States, winter wheat grown for dual-purpose is often planted early, which puts it at risk for drought stress at the seedling stage in the autumn. To map quantitative trait loci (QTL) associated with seedling drought tolerance, a genome-wide association study (GWAS) was performed on a hard winter wheat association mapping panel. Two sets of plants were planted in the greenhouse initially under well-watered conditions. At the five-leaf stage, one set continued to receive the optimum amount of water, whereas watering was withdrawn from the other set (drought stress treatment) for 14 days to mimic drought stress. Large phenotypic variation was observed in leaf chlorophyll content, leaf chlorophyll fluorescence, shoot length, number of leaves per seedling, and seedling recovery. A mixed linear model analysis detected multiple significant QTL associated with seedling drought tolerance-related traits on chromosomes 1B,

W inter wheat (Triticum aestivum L.) is commonly grown as a dual-purpose crop for forage and grain production in the southern Great Plains of the United States, including Kansas, Oklahoma, and Texas. The crop is grown for forage production during the winter season, when warm-season forage crops are dormant or not able to grow due to cold weather, and is later harvested for grain (Kim et al., 2016;MacKown et al., 2011;MacKown and Northup, 2010). The feed quality of any forage crop is one of the most desirable traits considered for forage

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This chapter covers the production and breeding status of winter wheat (Triticum aestivum L.) used for early-season animal grazing and late-season grain production in the Southern Great Plains of the United States. Besides, in the chapter, the current production status and needs, the drawbacks of current cultivars, breeding strategies of the crop, novel genomics tools, and sensor technologies that can be used to improve dual-purpose winter wheat cultivars were presented. We will focus on traits that are, in general, not required by cultivars used for grain-only production but are critical for cool-season forage production.

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