Field surveys have reported a global shift in harbour porpoise distribution in European waters during the last 15 years, including a return to the Atlantic coasts of France. In this study, we analyzed genetic polymorphisms at a fragment of the mitochondrial control region (mtDNA CR) and 7 nuclear microsatellite loci, for 52 animals stranded and by-caught between 2000 and 2010 along the Atlantic coasts of France. The analysis of nuclear and mitochondrial loci provided contrasting results. The mtDNA revealed two genetically distinct groups, one closely related to the Iberian and African harbour porpoises, and the second related to individuals from the more northern waters of Europe. In contrast, nuclear polymorphisms did not display such a distinction. Nuclear markers suggested that harbour porpoises behaved as a randomly mating population along the Atlantic coasts of France. The difference between the two kinds of markers can be explained by differences in their mode of inheritance, the mtDNA being maternally inherited in contrast to nuclear loci that are bi-parentally inherited. Our results provide evidence that a major proportion of the animals we sampled are admixed individuals from the two genetically distinct populations previously identified along the Iberian coasts and in the North East Atlantic. The French Atlantic coasts are clearly the place where these two previously separated populations of harbour porpoises are now admixing. The present shifts in distribution of harbour porpoises along this coast is likely caused by habitat changes that will need to be further studied.
The harbour porpoise (Phocoena phocoena) is one of the common small cetaceans of European waters. This discreet and undemonstrative species is strongly represented throughout the cold waters of the northern hemisphere, and is the most abundant cetacean in the North Sea. In the last few years, some observations and studies indicate a shift of harbour porpoise distribution in European waters, from northern regions of the North Sea to the southern North Sea, English Channel and Celtic Sea. This shift may include a comeback around the coasts of France. Harbour porpoises inhabit shelf-waters and are often observed in shallow waters, conditions offered for instance by the coasts of Brittany in north-western France. We used opportunistic sightings, aerial survey and a ten-year strandings database to study the presence of harbour porpoises along the coasts of Brittany. Opportunistic sightings made by non-specialists did not confirm a strong presence of harbour porpoises along the Brittany coasts, most probably because of the undemonstrative behaviour of this cetacean. However, aerial survey and stranding analysis indicate that harbour porpoises have become natural inhabitants of the Brittany coasts once more: 68.6% of cetacean school sightings made during a 1578 km aerial survey of the Brittany coasts concerned harbour porpoises, with an encounter rate of 1.5 individuals per 100 km that peaked to 5.8 per 100 km to the top of the shallow waters of the southwestern Western English Channel. The number of harbour porpoise strandings increased each year from 1997 to 2007, making a total of 135 along the coasts of Brittany. Other cetaceans did not show such an increase during the same period. Strandings of harbour porpoises were also characterized by an apparent increase as a proportion in relation to all the cetacean strandings during the months of September to January, by a marked impact of by-catch during winter, and by an almost total absence of stranded calves. The comeback of the harbour porpoise along Brittany coasts is clearly confirmed by our data, and a stable population seems to be established again along the coasts of Brittany. This tends to confirm the shift of the distribution of the species in certain European waters. Long term monitoring, diet and genetic studies are now planned for a better understanding of this shift, and for the effective implementation of a conservation plan.
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