The variability of mtDNA was analysed in local sheep breeds reared throughout Turkey, for which a fragment of the D-loop region and the complete cytochrome b were sequenced. Phylogenetic analyses performed independently for the D-loop and the Cyt b gene revealed three clearly separated clusters indicating three major maternal lineages, two of which had been previously described as types B and A. The new type, C, was present in all the breeds analysed and showed considerable mtDNA variability. Divergence time was obtained on the basis of Cyt b gene and was estimated to be around 160,000-170,000 years ago for lineages B and A, whereas the divergence of lineage C proved to have occurred earlier (between 450,000 and 750,000 years ago). These times greatly predate domestication and suggest that the origin of modern sheep breeds was more complex than previously thought and that at least three independent sheep domestication events occurred. Our results, together with archaeological information and the current wild sheep populations in the Near East region support the high importance of this area in the sheep domestication process. Finally, the evidence of a third maternal lineage has important implications regarding the history of modern sheep.

A total of 9592 samples of half udder milk were collected monthly throughout lactation for bacteriological and somatic cell count (SCC) study from 1322 Churra ewe lactations from seven separate flocks enrolled in the recording scheme of the National Association of Spanish Churra Breeders in the Castile-Le6n region of Spain. Statistical analyses were carried out from a mixed model with random factor half udder or ewe for repeated measures. Test of significance of fixed effects of this mixed model showed significant effects of organisms, flock, parity, lactation stage, and birth type on SCC. Special reference must be made to novobiocin-sensitive coagulase-negative staphylococci, which represented more than 50% of the isolates and which elicited SCC geometric means of around 106/ml. In addition, the analysis of 4352 monthly test-day records for milk yield, SCC, and bacteriology showed that the ewes that were uninfected and infected by minor pathogens had the lowest SCC and the highest milk yields, whereas those infected by major pathogens had high SCC and milk yield losses between 8.8 and 10.1% according to the uni- or bilateral character of the infection. Finally, ewes infected by novobiocin-sensitive coagulase-negative staphylococci elicited SCC values similar to those of infections by major pathogens and milk yield losses ranging between those caused by minor and major pathogens. As a result, emphasis should be put on prevention of subclinical mastitis, particularly mastitis caused by novobiocin-sensitive coagulase-negative staphylococci in dairy sheep herds to improve microbiological and hygienic milk quality and to minimize losses in milk yield.

Improvement of milk production traits in dairy sheep is required to increase the competitiveness of the industry and to maintain the production of high quality cheese in regions of Mediterranean countries with less favourable conditions. Additional improvement over classical selection could be reached if genes with significant effects on the relevant traits were specifically targeted by selection. However, so far, few studies have been undertaken to detect quantitative trait loci (QTL) in dairy sheep. In this study, we present a complete genome scan performed in a commercial population of Spanish Churra sheep to identify chromosomal regions associated with phenotypic variation observed in milk production traits. Eleven half-sib families, including a total of 1213 ewes, were analysed following a daughter design. Genome-wise multi-marker regression analysis revealed a genome-wise significant QTL for milk protein percentage on chromosome 3. Eight other regions, localized on chromosomes 1, 2, 20, 23 and 25, showed suggestive significant linkage associations with some of the analysed traits. To our knowledge, this study represents the first complete genome scan for milk production traits reported in dairy sheep. The experiment described here shows that analysis of commercial dairy sheep populations has the potential to increase our understanding of the genetic determinants of complex production-related traits.

Genetic parameters for milk yield, contents of fat, total protein, casein and serum protein, individual laboratory cheese yield, and somatic cell counts (SCC) were estimated from 7492 monthly test-day records of 1119 Churra ewes. Estimates were from multivariate REML using analytical gradients (AG-REML) procedures. Except for fat content, estimates for the other routinely recorded traits (milk yield, protein content, and SCC) agreed with those previously obtained in this and other dairy sheep populations. Protein content and composition had the highest heritabilities and repeatabilities. Heritabilities for protein and casein contents were very similar (0.23 and 0.21, respectively), and genetic correlation between the traits was close to unity (0.99). Accordingly, casein content is not advisable as an alternative to protein content as a selection criterion in dairy ewes; it does not have any compelling advantages and costs more to measure. Individual laboratory cheese yield (ILCY) obtained with Churra ewes had a low heritability (0.08), suggesting that potential for selection for this parameter would be possible but is not recommended. All correlations with ILCY were high and positive except for milk yield. A high SCC was accompanied by an increase in serum protein content and involved a loss in milk yield.

A total of 3119 test day records for milk yield, somatic cell count (SCC), and contents of fat, protein, casein, serum protein, lactose, and total solids were obtained weekly from 155 lactations of Churra ewes during both the suckling and milking periods. All of the variables were significantly affected by stage of lactation, number of live lambs weaned, age at parity, and parity number within age. The lactation curves for SCC and for percentages of protein, casein, fat, and total solids were related inversely to the lactation curves for milk yield and lactose percentage. The SCC curve reached its lowest point at wk 5, which coincided with the maximum milk yield. At wk 3, lactose content reached its peak, and contents of fat, protein, casein, and total solids reached their lowest points. After weaning, monthly within-lactation correlations of the variables were simulated; values were 0.584 for yield, 0.468 for SCC, 0.371 for casein percentage, 0.360 for total solids percentage, 0.350 for protein percentage, 0.342 for fat percentage, 0.270 for lactose percentage, and 0.030 for serum protein percentage. Simplified procedures based on only one milking (a.m. or p.m.) could be effective in the testing programs for milk yield and SCC, thus, reducing the economic costs of milk recordings in mammary health and breeding programs.

Between January 2006 and December 2007, a total of 4,579 test-day observations for contents of milk fatty acids (FA) were obtained from 2,218 lactations of 1,109 ewes belonging to 14 Churra dairy flocks. The 36 analyzed FA were quantified as grams per 100 g of total FA and were grouped as 18 dependent variables: 10 FA, 6 groups of FA, and 2 FA indexes. Flock, day of testing within flock (TD), ewe age, stage of lactation, and season effects contributed significantly to variations in FA. The 2 most important variation factors were flock (3 to 30% of total variance) and TD (35 to 70% of total variance). The percentage of variance explained by the TD effect for conjugated linoleic acid (CLA, C18:2 cis-9, trans-11) and linolenic acid (C18:3 cis-9, cis-12, cis-15) was particularly high: 60.7 and 68.2%, respectively. The season effect was also a very important variation factor, closely linked to feeding. The most significant seasonal variations were observed in polyunsaturated FA, with the highest values occurring in spring and summer and the lowest in winter. More specifically, CLA and linolenic acid contents were 44 and 30% higher in spring-summer than in winter. As the age of the ewe increased, the monounsaturated and polyunsaturated FA decreased and the short- and medium-chain saturated FA increased. The CLA and the CLA/C18:1 trans-11 Delta(9)-desaturase index increased significantly throughout lactation. The correlation coefficient between rumenic acid (CLA) and vaccenic acid was high (0.47) because of the precursor-product relationship via the Delta(9)-desaturase enzyme. The correlation coefficients were high between C10:0 and C12:0 (0.79), C12:0 and C14:0 (0.73), and C14:0 and C16:0 (0.29), probably because of their similar metabolic origin. Positive correlations were also obtained among the C(18) FA family. All the studied factors of FA variation would be considered as fixed effects in the statistical models used for estimation of genetic and phenotypic parameters from test-day records of commercial flocks.

Between January and July 1992, 8403 monthly test day records were obtained from 3202 ewes from 22 Churra dairy flocks in the Castilla-León region of Spain. Variables measured were milk yield, SCC, and fat and protein percentages; means were 912 ml, 1501 x 10(3) cells/ml, 6.76%, and 6.28%. Analysis of variance showed significant effects of flock, stage of lactation, parity, and type of birth on milk yield, SCC, and composition. Variability in SCC among flocks was high and ranged from 420 to 2719 x 10(3) cells/ml. During lactation, SCC and fat and protein percentages showed increases of 31.2, 37.6, and 20.3%. Twin birth ewes had higher SCC (8.6%) and yield (4.4%) than single birth ewes. However, fat and protein fell 1.7 and .8% in twin birth ewes. The parity effect was highly significant for yield, SCC, and fat; first lactation was always lower. A statistical model similar to that for dairy cattle was used to predict milk yield on the basis of flock, ewes within the flock, lactation stage, parity number, type of birth, and SCC. The model predicted 73% of the variation in milk yield.

A total of 1382 milk samples from half udders of three breeds of ewes (686 Assaf, 422 Churra, and 274 Castellana) were collected aseptically at midlactation from 18 flocks in the Castile-León region of Spain. Bacteriological tests were carried out on the samples to ascertain the status and type of IMI. Somatic cell counts were determined for all samples after bacteriological analysis. Analysis of variance showed significant effects of breed, IMI status, flock nested within breed by milking type, organism within IMI status, and interactions of breed by milking type and of breed by organism. The most frequent bacterial groups were staphylococci, especially coagulase-negative staphylococci, followed by streptococci, micrococci, and yeasts. The SCC response was related to the bacterial group involved in the IMI; coagulase-negative staphylococci showed significantly lower SCC values than those for coagulase-positive staphylococci and streptococci. Highest percentages of IMI by major pathogens and highest SCC, both in the absence of IMI and in staphylococcal IMI, were in Assaf ewes. The threshold of 300,000 cells/ml allowed 81% of the half udders to be correctly classified according to IMI status. However, the existence of breed differences in SCC response and IMI type could make the use of specific SCC thresholds for each breed advisable.