Strigolactones (SLs) represent a class of plant hormones that regulate developmental processes and play a role in the response of plants to various biotic and abiotic stresses. Both in planta hormonal roles and ex planta signalling effects of SLs are potentially interesting agricultural targets. In this review, we explore various aspects of SL function and highlight distinct areas of agriculture that may benefit from the use of synthetic SL analogues, and we identify possible bottlenecks. Our objective is to identify where the contributions of science and stakeholders are still needed to achieve harnessing the benefits of SLs for a sustainable agriculture of the near future.
Drought sensitivity of potato leads to a reduction in total tuber yield and marketable yield. An investigation of drought effects on tuber yield attributes will facilitate our understanding of how to reduce such huge yield losses. We have evaluated tuber yield, tuber size distribution and marketable yield of a set of 103 European commercial potato cultivars under irrigated and non-irrigated conditions in the field. The multi-year results from two locations, Connantre, France (2013-2015) and Nieuw-Namen in Zeeland, The Netherlands (2013-2014), were analysed. We used Normal and Gamma Distribution models to describe the tuber size distribution of tuber fresh weight and tuber number, respectively. The interactions among parameters of tuber size distribution and total/marketable tuber yield traits were analysed using correlation matrices and biplots. Finally, we used a 14K Infinium SNP marker array to find associations between the parameters or traits and genetic loci on the potato genome. Late foliage maturity facilitated a wider spread of tuber size distribution in favour of larger-sized tubers. Drought effects on total yield were representative of their impact on marketable yield, however, absolute values of total tuber number may not be indicative of marketable number of tubers. We found significant marker-trait associations between a region on chromosome 3 and the spread of tuber number distribution, size class with maximum tuber number and marketable fractions of tuber number and tuber weight. These findings will contribute to improvement and selection for drought tolerance in potato. Keywords Drought Á Association panel Á Marketable tubers Á Size Á Modelling Á Yield Abbreviations TBW Tuber fresh weight TBN Tuber number TBW MX Maximum tuber fresh weight observed among size classes TBW mcs Average tuber size of the class at which TBW MX occurs TBW spread Wideness or spread of tuber size distribution of tuber fresh weight TBN ms Tuber number mean size Electronic supplementary material The online version of this article (
Main conclusion Adaptation of the xylem under dehydration to smaller sized vessels and the increase in xylem density per stem area facilitate water transport during water-limiting conditions, and this has implications for assimilate transport during drought.
Transcriptomic changes in plants during drought stress give insights into the mechanisms with which plants stabilise their metabolic processes in order to cope with the drought condition. In potato, understanding such drought-induced transcriptomic changes is critical because prolonged field drought interferes with tuber formation and bulking period of potato development, which eventually affects yield. We hypothesised that phenotypic drought responses of potato genotypes may be linked to differences in transcriptomic changes. Using an RNA sequencing approach, we investigated such transcriptomic changes in leaves of three cultivars (Biogold, Hansa and Lady Rosetta) under drought. We found more differentially expressed genes (DEGs) in the tolerant cultivars, Lady Rosetta and Biogold, than in the sensitive cultivar (Hansa). The differential gene expression trend reflected the phenotypic drought responses of the cultivars. For instance, we found in both Biogold and Lady Rosetta but not in Hansa, an upregulation of genes involved in carbohydrate metabolism (e.g., Alpha-glucosidase), flavonoid biosynthesis (e.g., Flavanone 3 beta-hydroxylase), lipid biosynthesis/transfer (e.g., nonspecific Lipid Transfer Proteins), heat shock proteins and secondary metabolites like phenolics and lignins. Furthermore, a prolonged drought stress resulted in reduced DEGs in Biogold and Hansa, but not in Lady Rosetta that also maintained its tuber yield under such prolonged stress suggesting a more robust drought tolerance. Our findings suggest that a synergistic expression of genes involved in several different aspects of drought response is required in order to obtain a robust tolerance.
A micropore-filtration method was used to reduce the proportion of plant DNA in microbial DNA samples isolated from roots prior to sequencing. We tested the impact of this pre-sequencing filtration methodology and used it to characterize the root microbiome of maize grown on two soils with different fertility levels. The micropore filtration reduced plant DNA contamination and unveiled potential in the N-poor soil for N fixation in roots and phosphate uptake by roots in the phosphate-poor soil. Our methodology and findings allude to the potential capability of plants to initiate plant-microbe interactions under sub-optimal soil fertility.
Deciphering the genetic basis of complex traits like nitrogen use efficiency (NUE) requires understanding the genotype-by-environment (G × E) interaction and linking physiological functions and agronomic traits to DNA markers. Multi-environment experiments were conducted in different environments representing low and high nitrogen levels combined with rain-fed and irrigation production conditions at three different locations in Ethiopia: Debre-Tabor, Injibara and Koga, in 2013 and 2015. The objectives of the study were to determine the G × E interaction and stability of genotypes for NUE of potato and to identify markers associated with NUE and NUE-related agronomic and physiological traits in potato under these diverse environments. Data were analyzed using GenStat, and genotype plus the genotype and environment (GGE) biplot model; the marker-trait associations were discovered using the R-software package GWASpoly. The analysis of variance that included location and production system had estimates for genotype variance (σ2g) that were low compared with the estimates for environment variance (σ2e) and genotype-by-environment interaction variance (σ2ge) for most measured traits at both N levels. The GGE analysis identified two mega-environments that coincided with the two production systems. The high N level environments both at Debre-Tabor and Injibara, and the low N environment at Koga, respectively, were the most suitable environments for discriminating the potato cultivars and being representative test environments for NUE evaluation in the rain-fed mega-environment and irrigation mega-environment. A total of 77 marker trait associations were identified for NUE and NUE-related agronomic and physiological traits. Multi-trait genomic regions that harbored significant marker-trait associations for NUE and NUE-related traits were found on chromosomes III, V and VI. The effect of production season was greater than the effect of N levels on QTL × environment interaction for most NUE-related traits.
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