Summary1. Reliable assessment of animal populations is a long-standing challenge in wildlife ecology. Technological advances have led to widespread adoption of camera traps (CTs) to survey wildlife distribution, abundance and behaviour. As for any wildlife survey method, camera trapping must contend with sources of sampling error such as imperfect detection. Early applications focused on density estimation of naturally marked species, but there is growing interest in broad-scale CT surveys of unmarked populations and communities. Nevertheless, inferences based on detection indices are controversial, and the suitability of alternatives such as occupancy estimation is debatable. 2. We reviewed 266 CT studies published between 2008 and 2013. We recorded study objectives and methodologies, evaluating the consistency of CT protocols and sampling designs, the extent to which CT surveys considered sampling error, and the linkages between analytical assumptions and species ecology. 3. Nearly two-thirds of studies surveyed more than one species, and a majority used response variables that ignored imperfect detection (e.g. presence-absence, relative abundance). Many studies used opportunistic sampling and did not explicitly report details of sampling design and camera deployment that could affect conclusions. 4. Most studies estimating density used capture-recapture methods on marked species, with spatially explicit methods becoming more prominent. Few studies estimated density for unmarked species, focusing instead on occupancy modelling or measures of relative abundance. While occupancy studies estimated detectability, most did not explicitly define key components of the modelling framework (e.g. a site) or discuss potential violations of model assumptions (e.g. site closure). Studies using relative abundance relied on assumptions of equal detectability, and most did not explicitly define expected relationships between measured responses and underlying ecological processes (e.g. animal abundance and movement). 5. Synthesis and applications. The rapid adoption of camera traps represents an exciting transition in wildlife survey methodology. We remain optimistic about the technology's promise, but call for more explicit consideration of underlying processes of animal abundance, movement and detection by cameras, including more thorough reporting of methodological details and assumptions. Such transparency will facilitate efforts to evaluate and improve the reliability of camera trap surveys, ultimately leading to stronger inferences and helping to meet modern needs for effective ecological inquiry and biodiversity monitoring.
Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species’ threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that support computation of a range of biodiversity indicators, is necessary to enable better understanding of historical declines and to project – and avert – future declines. We describe and assess a new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database contains measurements taken in 208 (of 814) ecoregions, 13 (of 14) biomes, 25 (of 35) biodiversity hotspots and 16 (of 17) megadiverse countries. The database contains more than 1% of the total number of all species described, and more than 1% of the described species within many taxonomic groups – including flowering plants, gymnosperms, birds, mammals, reptiles, amphibians, beetles, lepidopterans and hymenopterans. The dataset, which is still being added to, is therefore already considerably larger and more representative than those used by previous quantitative models of biodiversity trends and responses. The database is being assembled as part of the PREDICTS project (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems – http://www.predicts.org.uk). We make site-level summary data available alongside this article. The full database will be publicly available in 2015.
ABSTRACT. Acoustic surveys are a widely used sampling tool in ecological research and monitoring. They are used to monitor populations and ecosystems and to study various aspects of animal behavior. Autonomous recording units (ARUs) can record sound in most environments and are increasingly used by researchers to conduct acoustic surveys for birds. In this review, we summarize the use of ARUs in avian ecological research and synthesize current knowledge of the benefits and drawbacks of this technology. ARUs enable researchers to do more repeat visits with less time spent in the field, with the added benefits of a permanent record of the data collected and reduced observer bias. They are useful in remote locations and for targeting rare species. ARUs are mostly comparable to human observers in terms of species richness, but in some cases, they detect fewer species and at shorter distances. Drawbacks of ARUs include the cost of equipment, storage of recordings, loss of data if units fail, and potential sampling trade-offs in spatial vs. temporal coverage. ARUs generate large data sets of audio recordings, but advances in automated species recognition and acoustic processing techniques are contributing to make the processing time manageable. Future applications of ARUs include biodiversity monitoring and studying habitat use, animal movement, and various behavioral ecology questions based on vocalization activity. ARUs have the potential to make significant advances in avian ecological research and to be used in more innovative ways than simply as a substitute for a human observer in the field. Unités d'enregistrement autonomes en écologie aviaire : utilisations actuelles et futuresRÉSUMÉ. Les relevés acoustiques sont largement employés comme outil d'échantillonnage pour la recherche et les suivis écologiques. Ils sont utilisés pour suivre les populations et les écosystèmes et étudier le comportement animal sous divers angles. Les unités d'enregistrement autonomes (ARU, pour autonomus recording units) peuvent enregistrer les sons dans la plupart des environnements et sont utilisés de plus en plus souvent par les chercheurs pour effectuer des relevés acoustiques d'oiseaux. Dans la présente revue, nous résumons l'utilisation d'ARU en écologie aviaire et synthétisons les avantages et désavantages connus de cette technologie. Les ARU permettent aux chercheurs de faire plus de visites répétées tout en passant moins de temps sur le terrain, avec l'avantage d'avoir un enregistrement permanent des données récoltées et de réduire le biais associé à l'observateur. Ils sont utiles en milieu éloigné et dans les cas où on cible des espèces rares. Les ARU sont comparables aux observateurs humains pour ce qui est de la richesse spécifique, mais dans certains cas, ils détectent moins d'espèces et à des distances plus courtes. Les désavantages des ARU comprennent le coût de l'équipement, la sauvegarde des enregistrements, la perte de données en cas de défaillance des unités, et le compromis possible à devoir faire sur le plan de la...
The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
Summary1. Anthropogenic noise is rapidly increasing in wilderness areas as a result of industrial expansion. While many road studies have attempted to assess the effects of industrial noise on birds, conflicting factors such as edge effects often inhibit the ability to draw strong conclusions. 2. We assessed pairing success and age distribution of male ovenbirds Seiurus aurocapilla in the boreal forest of Alberta, Canada, in areas around noise-generating compressor stations compared with areas around habitat-disturbed, but noiseless, wellpads. This allowed us to control for edge effects, human visitation and other factors that are not controlled for in studies of noise generated by roads. Generalized estimating equations (GEE) were used to assess the impacts of noise on ovenbird pairing success, age structure and body morphology. 3. We found a significant reduction in ovenbird pairing success at compressor sites (77%) compared with noiseless wellpads (92%). These differences were apparent regardless of territory quality or individual male quality. Significantly more inexperienced birds breeding for the first time were found near noise-generating compressor stations than noiseless wellpads (48% vs. 30%). 4. While there are multiple proximate explanations for these results, the ultimate cause of the changes seems to be noise pollution. We hypothesize that noise interferes with a male's song, such that females may not hear the male's song at greater distances and/or females may perceive males to be of lower quality because of distortion of song characteristics. 5. Synthesis and applications. This work demonstrates that chronic background noise could be an important factor affecting bird populations. It can impact upon pairing success and age structure of passerines; in boreal Alberta this could pose a problem for certain species as energy development expands rapidly.
The effects of human activities in forests are often examined in the context of habitat conversion. Changes in habitat structure and composition are also associated with increases in the activity of people with vehicles and equipment, which results in increases in anthropogenic noise. Anthropogenic noise may reduce habitat quality for many species, particularly those that rely on acoustic signals for communication. We compared the density and occupancy rate of forest passerines close to versus far from noise-generating compressor stations and noiseless well pads in the boreal forest of Alberta, Canada. Using distance-based sampling, we found that areas near noiseless energy facilities had a total passerine density 1.5 times higher than areas near noise-producing energy sites. The White-throated Sparrow (Zonotrichia albicollis), Yellow-rumped Warbler (Dendroica coronata), and Red-eyed Vireo (Vireo olivaceus) were less dense in noisy areas. We used repeat sampling to estimate occupancy rate for 23 additional species. Seven had lower conditional or unconditional occupancy rates near noise-generating facilities. One-third of the species examined showed patterns that supported the hypothesis that abundance is influenced by anthropogenic noise. An additional 4 species responded negatively to edge effects. To mitigate existing noise impacts on birds would require approximately $175 million. The merits of such an effort relative to other reclamation actions are discussed. Nevertheless, given the $100 billion energy-sector investment planned for the boreal forest in the next 10 years, including noise suppression technology at the outset of construction, makes noise mitigation a cost-effective best-management practice that might help conserve high-quality habitat for boreal birds.
Summary1. The analysis of large heterogeneous data sets of avian point-count surveys compiled across studies is hindered by a lack of analytical approaches that can deal with detectability and variation in survey protocols. 2. We reformulated removal models of avian singing rates and distance sampling models of the effective detection radius (EDR) to control for the effects of survey protocol and temporal and environmental covariates on detection probabilities. 3. We estimated singing rates and EDR for 75 boreal forest songbird species and found that survey protocol, especially point-count radius, explained most of the variation in detectability. However, environmental and temporal covariates (date, time, vegetation) affected singing rates and EDR for 73% and 59% of species, respectively. 4. Unadjusted survey counts increased by an average of 201% from a 5-min, 50-m radius survey to a 10-min, 100-m radius survey (n = 75 species). This variability was decreased to 8Á5% using detection probabilities estimated from a combination of removal and distance sampling models. 5. Our modelling approach reduced computation when fitting complex models to large data sets and can be used with a wide range of statistical techniques for inference and prediction of avian densities.
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