This, partly retrospective study, was designed to determine the seroprevalence of Schmallenberg virus (SBV), a new Orthobunyavirus first reported in Germany in late 2011, in domestic ruminants from the Middle Black Sea, West, and Southeast regions of Turkey. An indirect enzyme-linked immunosorbent assay was used to screen serum samples collected from slaughterhouse animals between 2006 and 2013. The overall seroprevalence was 335/1,362 (24.5 %) with 325/816 (39.8 %), 5/307 (1.6 %), 3/109 (2.8 %), and 2/130 (1.5 %) recorded in cattle, sheep, goats, and Anatolian water buffalo, respectively. This is the first study to demonstrate the presence of antibodies to SBV in Turkish ruminants; it indicates that cattle are more susceptible to infection than sheep, goats, or buffalo and that exposure of domestic ruminants to SBV in Turkey may have occurred up to 5 years prior to the first recorded outbreak of the disease in 2011.

All pestiviruses are important veterinary pathogens causing economic losses in cattle, sheep and pigs. Besides the important economical losses, pestiviruses may compromise the normal immune response to other pathogens and increase the severity of other infections in sheep. In this study, aborted foetuses (cattle and sheep) in either coastal or inland Black Sea region of Turkey were surveyed for the presence of RNA from pestiviruses (bovine viral diarrhoea virus (BVDV), border disease virus (BDV)). The presence of BVDV RNA was found in 6 of 21 aborted calves (28.57%), although BDV RNA was detected in 14 of 21 aborted lambs (66.66%) by reverse transcriptase polymerase chain reaction. This study also investigates the distribution of viral RNA within the brain, liver and lung of aborted foetuses. The viral RNA positivity rates for the organs varied and were as follows: brain 40.47% and liver and lung 38.09%. The results revealed that pestiviruses are important abort pathogen in the provinces of northern Turkey.

A respiratory disease outbreak on a cattle farm in northern Turkey produced respiratory tract symptoms and severe pneumonia symptoms in 20 calves. Eight calves died, and a lung specimen from one carcass was analysed for bacteria and for viruses of the Bovine respiratory diseases complex. Bacteriological analysis was negative, but antigen detection ELISA and RT-PCR results indicated the presence of Bovine parainfluenza virus (BPIV). Virus isolation succeeded on Madin-Darby Bovine Kidney cells, and subsequent whole genome sequencing and phylogenetic analysis identified BPIV-3c. This is the first report of BPIV-3c isolation from cattle in Turkey, indicating the need for more virological and epidemiological studies.

In this study, the hard ticks, whole blood and serum samples collected from small ruminants (sheep and goat) in middle Black Sea region of Turkey where Crimean-Congo hemorrhagic fever (CCHF) human cases were observed in the past years were surveyed for the presence of RNA and specific IgG antibodies from CCFH virus (CCHFV). CCHFV RNA was found in 30 of 255 tick pools (11.76%) and nine of 105 (8.57%) leucocyte samples. No CCHFV genomic RNA was detected from animals in Yildizeli and Vezirkopru. However, CCHFV RNA was found from animals in Gerze and Resadiye. Seventy-eight of 105 goat and sheep blood serum samples tested were antibody-positive for CCHFV by enzyme-linked immunosorbent assay (ELISA) (goat: 42/63; sheep: 36/42). Viral RNA was detected from tick samples in all of four provinces. Positivity rates for the provinces varied and were as follows: Gerze 13.04%, Resadiye 35.41%, Vezirkopru 1.61% and Yildizeli 6.06%. CCHFV genomic RNA was detected in four of seven tick species tested. These results suggest that these hard ticks may act as a reservoir for CCHFV in northern Turkey.

In this study, the hard ticks collected from a variety of mammalian species (cattle, sheep, goat, buffalo) and a turtle in either coastal or inland Black Sea region of Turkey were surveyed for the presence of RNA from Crimean-Congo haemorrhagic fever virus (CCHFV) and West Nile virus (WNV). No WNV genomic RNA was detected in any tick sample. However, CCHFV RNA was found in 29 of 421 tick pools (6.88%). Positivity rates for the provinces varied and were as follows: Samsun 4.38%; Ordu 4.34%; Giresun 6.32%; Sinop 14.63%; Amasya 5.55%; Tokat 3.38% and Sivas 4.83%. Crimean-Congo haemorrhagic fever virus genomic RNA was detected in seven of eleven tick species tested. These results suggest that these hard ticks may act as a reservoir for CCHFV in northern Turkey, but probably have no role in WNV transmission.

Infectious pancreatic necrosis virus (IPNV) and viral haemorrhagic septicaemia virus (VHSV) are two of the major viral threats faced by the aquaculture industry in Turkey. The aim of our study was to investigate the pathogenicity of two Turkish viral strains isolated locally from the Bolu VHSV strain (Accession number: KM972678.1) and the HAH‐4 IPNV strain (Accession number: KM972675). The titres of infectious virus were determined by virus titration tests using monolayer cultures of EPC cells to determine the challenge dose. The challenge trial was conducted with 40 rainbow trout (Oncorhynchus mykiss (Walbaum)) for each virus and control group. The infective dose of each virus was applied intraperitoneally as 1 × 107 of the tissue culture infective dose per ml. At the end of the trial period (day 21), all fish were examined for clinical signs and post‐mortem changes. The average mortality rates for VHSV and IPNV were 36.6% and 33.3%, respectively. Necropsies performed on the deceased fish revealed the presence of IPNV only in fish that had been infected with IPNV, as determined using a real‐time PCR method targeting the VP3 gene region of the virus. Similarly, VHSV was detected only in the fish infected with VHSV using a real‐time PCR method targeting the gG gene region of the virus. In conclusion, the Bolu strain of VHSV and the HAH‐4 strain of IPNV each has moderate pathogenicity in rainbow trout.

During the hunting season in March 2012, a total of 93 blood samples were collected from wild boars (Sus scrofa) shot in the area of northern Turkey (Samsun and Gumushane provinces). These blood samples were examined by enzyme immunoassay (ELISA) for the presence of antibodies to classical swine fever virus (CSFV), Aujeszky's disease virus (ADV), porcine reproductive and respiratory syndrome virus (PRRSV), porcine respiratory coronavirus (PRCV), swine influenza virus (SIV), porcine parvovirus (PPV), swine vesicular disease virus (SVDV), hepatitis E virus (HEV), African swine fever virus (ASFV), porcine rotavirus (PRV), transmissible gastroenteritis virus (TGEV) and bovine viral diarrhoea virus (BVDV). Out of 93 serum samples examined, 65 (69.9 %) were positive for PRV, 22 (23.7 %) were positive for ADV, 5 (5.4 %) were positive for BVDV, 4 (4.3 %) were positive for PPV and 2 (2.2 %) were positive for PRRSV. All sera were negative for ASFV, SVDV, HEV, SIV, PRCV, TGEV and CSFV. The results, recorded for the first time in Turkey, supported the hypothesis that wild boar act as a potential reservoir of selected viruses and thus have a role in the epidemiology of these diseases. Materials and methodsWild boar and domestic pigs are a similar species. In this study, serum samples were collected from 93 hunter-killed wild boars that were harvested during the 2012 hunting season in northern Turkey (Samsun and Gumushane provinces) which has the suitable geographical conditions, including agricultural area and forest for wildlife ( Fig. 1). Sex was determined (38 males and 55 females) and also age was determined using tooth eruption patterns, and animals were grouped into two age classes: 13 to <24 months old (31 subadults) and >24 months old (62 adults). Blood was collected from the heart, centrifuged at 1,200×g for 15 min,

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