The occurrence of microbial enteropathogens in the environment can represent a serious risk to human health. The fate of enteropathogens introduced into the soil environment is dependent on a wide range of complex interacting environmental factors. While the effect of abiotic factors on enteropathogen survival has been widely examined, the interaction of enteropathogens with the soil microbial community is poorly understood. This study investigated the effect of soil biology and soil type on the survival of a non-toxigenic strain of Escherichia coli O157 under different temperature regimes. Soil microcosms of two soil types, with and without an intact microbial community, were inoculated with the enteropathogen surrogate, and survival was determined over a 64-day period, encompassing a shift from cold to ambient temperatures. In both soil types bacterial numbers decreased in soil with an intact microfl ora, while in the absence of an intact community E. coli populations increased. This effect was temperature specifi c, with E. coli populations remaining stable at low temperature, regardless of treatment. Soil type was of importance in survival at both cold and ambient temperatures. This work highlights the signifi cance of the soil microbial community in suppressing enteropathogens in soil, and of investigating die-off in a multi-factorial manner.
Physicochemical and biotic data were used in stepwise regression analysis to determine the predominant factor related to pathogen-specific death rates. Phenotypic structure, associated with a diverse range of constituent PLFAs, was identified as the most significant factor in pathogen decay for S.Dublin, L. monocytogenes, non-toxigenic E. coli O157 but not for environmentally-persistent E. coli. This demonstrates the importance of entire community-scale interactions in pathogen suppression, and that such interactions are context-specific.5
Nitrification inhibitors are used in agriculture for the purpose of decreasing nitrogen (N) losses, by limiting the microbially mediated oxidation of ammonium (NH 4 + ) to nitrate (NO 3 − ). Successful inhibition of nitrification has been shown in numerous studies, but the extent to which inhibitors affect other N transformations in soil is largely unknown. In the present study, cattle slurry was applied to microcosms of three different grassland soils, with or without the nitrification inhibitor dicyandiamide (DCD). A solution containing NH 4 + and NO 3 − , labelled with 15 N either on the NH 4 + or the NO 3 − part, was mixed with the slurry before application. Gross N transformation rates were estimated using a 15 N tracing model. In all three soils, DCD significantly inhibited gross autotrophic nitrification, by 79-90%. Gross mineralization of recalcitrant organic N increased significantly with DCD addition in two soils, whereas gross heterotrophic nitrification from the same pool decreased with DCD addition in two soils. Fungal to bacterial ratios were not significantly affected by DCD addition. Total gross mineralization and immobilization increased significantly across the three soils when DCD was used, which suggests that DCD can cause non-target effects on soil N mineralization-immobilization turnover.
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