Wheat kernel shape and size has been under selection since early domestication. Kernel morphology is a major consideration in wheat breeding, as it impacts grain yield and quality. A population of 160 recombinant inbred lines (RIL), developed using an elite (ND 705) and a nonadapted genotype (PI 414566), was extensively phenotyped in replicated field trials and genotyped using Infinium iSelect 90K assay to gain insight into the genetic architecture of kernel shape and size. A high density genetic map consisting of 10,172 single nucleotide polymorphism (SNP) markers, with an average marker density of 0.39 cM/marker, identified a total of 29 genomic regions associated with six grain shape and size traits; ~80% of these regions were associated with multiple traits. The analyses showed that kernel length (KL) and width (KW) are genetically independent, while a large number (~59%) of the quantitative trait loci (QTL) for kernel shape traits were in common with genomic regions associated with kernel size traits. The most significant QTL was identified on chromosome 4B, and could be an ortholog of major rice grain size and shape gene GS3 or qGL3. Major and stable loci also were identified on the homeologous regions of Group 5 chromosomes, and in the regions of TaGW2 (6A) and TaGASR7 (7A) genes. Both parental genotypes contributed equivalent positive QTL alleles, suggesting that the nonadapted germplasm has a great potential for enhancing the gene pool for grain shape and size. This study provides new knowledge on the genetic dissection of kernel morphology, with a much higher resolution, which may aid further improvement in wheat yield and quality using genomic tools.
A population developed from an exotic line with supernumerary spikelets was genetically dissected for eight quality traits, discovering new genes/alleles with potential use in wheat breeding programs. Identifying new QTLs and alleles in exotic germplasm is paramount for further improvement of quality traits in wheat. In the present study, an RIL population developed from a cross of an elite wheat line (WCB414) and an exotic genotype with supernumerary spikelets (SS) was used to identify QTLs and new alleles for eight quality traits. Composite interval mapping for 1,000 kernels weight (TKW), kernel volume weight (KVW), grain protein content (GPC), percent of flour extraction (FE) and four mixograph-related traits identified a total of 69 QTLs including 19 stable QTLs. These QTLs were located on 18 different chromosomes (except 4D, 5D, and 6D). Thirteen of these QTLs explained more than 15% of phenotypic variation (PV) and were considered as major QTLs. In this study, we identified 11 QTLs for TKW (R (2) = 7.2-17.1 %), 10 for KVW (R (2) = 6.7-22.5%), 11 for GPC (R (2) = 4.7-16.9%), 6 for FE (R (2) = 4.8-19%) and 31 for mixograph-related traits (R (2) = 3.2-41.2%). In this population, several previously identified QTLs for SS, nine spike-related and ten agronomic traits were co-located with the quality QTLs, suggesting pleiotropic effects or close linkage among loci. The traits GPC and mixogram-related traits were positively correlated with SS. Indeed, several loci for quality traits were co-located with QTL for SS. The exotic parent contributed positive alleles that increased PV of the traits at 56% of loci demonstrating the suitability of germplasm with SS to improve quality traits in wheat.
-The objectives of this work were to study the genetic control of grain yield (GY) and nitrogen (N) use efficiency (NUE, grain yield/N applied) and its primary components, N uptake efficiency (NUpE, N uptake/N applied) and N utilization efficiency (NUtE, grain yield/N uptake), in maize grown in environments with high and low N availability. Experiments with 31 maize genotypes (28 hybrid crosses and three controls) were carried out in soils with high and low N rates, in the southeast of the state of Minas Gerais, Brazil. There was a reduction of 23.2% in average GY for maize grown in soil with low N, in comparison to that obtained with high N. There were 26.5, 199 and 400% increases in NUtE, NUpE, and NUE, respectively, for maize grown with low N. The general combining ability (GCA) and specific combining ability (SCA) were significant for GY, NUE and NUpE for maize grown in high N soil. Only GCA was significant for NUpE for maize grown in low N soil. The GCA and SCA for NUtE were not significant in either environment. Additive and non-additive genetic effects are responsible for the genetic control of NUE and GY for maize grown in soils with high N availability, although additive effects are more important. Index terms: Zea mays, abiotic stress, absorption efficiency, combining ability, commercial hybrids, utilization efficiency. Controle genético da produção de grão e da eficiência de uso do nitrogênio em milho tropicalResumo -O objetivo deste trabalho foi estudar o controle genético da produtividade de grãos (PG) e da eficiência no uso de nitrogênio (EUN, produção de grãos/N aplicado) e seus componentes primários -eficiência de absorção (EAbN, N absorvido/N aplicado) e utilização (EUtN, produção de grãos/N absorvido) -, em milho cultivado em ambientes com alta e baixa disponibilidade de nitrogênio. Trinta e um genótipos de milho (28 cruzamentos entre híbridos comerciais e três testemunhas) foram avaliados em solos com alta e baixa doses de aplicação de N. Houve redução de 23,2% na média de PG em milho cultivado em solo com baixo teor de N, em relação à obtida com alto N.
The genetic gain in yield and quality are two major targets of wheat breeding programs around the world. In this study, a high density genetic map consisting of 10,172 SNP markers identified a total of 43 genomic regions associated with three quality traits, three yield traits and two agronomic traits in hard red spring wheat (HRSW). When compared with six grain shape and size traits, the quality traits showed mostly independent genetic control (~18% common loci), while the yield traits showed moderate association (~53% common loci). Association of genomic regions for grain area (GA) and thousand-grain weight (TGW), with yield suggests that targeting an increase in GA may help enhancing wheat yield through an increase in TGW. Flour extraction (FE), although has a weak positive phenotypic association with grain shape and size, they do not share any common genetic loci. A major contributor to plant height was the Rht8 locus and the reduced height allele was associated with significant increase in grains per spike (GPS) and FE, and decrease in number of spikes per square meter and test weight. Stable loci were identified for almost all the traits. However, we could not find any QTL in the region of major known genes like GPC-B1, Ha, Rht-1, and Ppd-1. Epistasis also played an important role in the genetics of majority of the traits. In addition to enhancing our knowledge about the association of wheat quality and yield with grain shape and size, this study provides novel loci, genetic information and pre-breeding material (combining positive alleles from both parents) to enhance the cultivated gene pool in wheat germplasm. These resources are valuable in facilitating molecular breeding for wheat quality and yield improvement.
Branched spike or supernumerary spikelet (SS) is a naturally occurring variant in wheat and holds great potential for increasing the number of grains per spike, and ultimately, increasing wheat yield. However, detailed knowledge of the molecular basis of spike branching in common wheat is lacking. In the present study, a recombinant inbred line (RIL) population derived from the cross of an SS accession and an elite non-SS line was developed and evaluated over four to six environments for seven SS-related traits to identify the genetic basis of SS in wheat. A framework linkage map was generated using 939 diversity arrays technology (DArT) markers. Composite interval mapping (CIM) identified a total of seven consistent quantitative trait loci (QTL) located on five chromosomes (2D, 5B, 6A, 6B, and
In wheat, exotic genotypes harbor a broad range of spike-related traits, and can be used as a source of new genes for germplasm enhancement in wheat breeding programs. In the present study, a population of 163 recombinant inbred lines was derived from a cross between an elite line (WCB414) and an exotic line (WCB617) with branched spike (supernumerary spikelet; SS) head morphology. The population was evaluated over four to six environments to identify quantitative trait loci (QTL) associated with nine spike-related traits and 10 agronomic traits. A genetic map consisting of 939 diversity arrays technology (DArT) markers was constructed. Composite interval mapping identified a total of 143 QTL located on 17 different wheat chromosomes and included 33 consistent and definitive QTL. The amount of phenotype variation explained (PVE) by individual QTL ranged from 0.61 to 91.8%. One major QTL for glume pubescence was located in a QTL-rich region on the short arm of chromosome 1A, where loci for other traits such as for kernels per spike (KS) and spike length (SL) were also identified. Similarly, a cluster of QTL associated with yield-related, agronomic and spike-related traits contributing up to 40.3% of PVE was found on the short arm of chromosome 2D, in the vicinity of a major QTL for SS-related traits. Consistent and major QTL identified in the present study may be useful in markerassisted breeding programs to facilitate transfer of desirable alleles into other germplasm. Desirable QTL alleles were also contributed by the exotic line, suggesting the possibility of enriching the breeding germplasm with alleles from SS genotypes. The wheat (Triticum aestivum L.) spike (also termed ear) is the most readily identifiable characteristic of common wheat and is the source of the primary crop product, grain. Spike architecture is defined by spikerelated traits, which contribute to pronounced phenotypic differences among wheat subspecies. For instance, the spikes of spelt wheat (T. aestivum ssp. spelta) have a long and fragile rachis, lax density with spikelets well separated from each other on the rachis, and are not free threshing (Percival, 1921;Jantasuriyarat et al., 2004). The spikes of club wheat (T. aestivum ssp. compactum) however, have a tough rachis, short length, are laterally compressed with spikelets closely packed, and are
-The aim of this study was to compare the multivariate methods GGE (Genotype main effects and Genotype x Environment interaction) and AMMI (Additive Main effects and Multiplicative Interaction) with the method of Eberhart and Russell for interpreting genotype x environment interaction. The AMMI and GGE analysis explained around 50% of the sum of squares of the genotype x environment interaction, whereas the method of Eberhart and
Inter-relações de nitrogênio e fósforo na capacidade de combinação e na seleção em milho Rev. Ceres, Viçosa, v. 57, n.5, p. 633-641, set/out, 2010 RESUMO ABSTRACTNitrogen and phosphorus interrelationships for combining ability and selection in maize Phosphorus (P) deficiency has been reported to reduce nitrogen uptake (N) in maize, but the effect of this combination for parent selection still needs further studies. The objective of this work was to evaluate the interrelationship between P and N in the combining ability and parent selection in maize. Twent-eight hybrid combinations (CH), obtained from a complete diallel among eight maize genotypes, and three controls were evaluated in four environments characterized by a combination of high and low P and N availability. Grain yield (GY) and the secondary traits plant height (PH), ear height (EH), harvest index (HI), volumetric weight (VW), prolificacy (PRL) and dry weight of aerial parts (DWAP) were evaluated. The effect of nitrogen stress on GY was similar in the conditions of low and high P. The genotype P3041 showed high GY in all environments. Genetic correlations among secondary traits with GY were affected by all Recebido para publicação em julho de 2008 e aprovado em agosto de 2010 1 Parte da tese de Doutorado do primeiro autor apresentado ao Programa de Pós-Graduação em Genética e Melhoramento da UFV.
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