DNA methylation is a dynamic and reversible process that governs gene expression during development and disease. Several examples of active DNA demethylation have been documented, involving genome-wide and gene-specific DNA demethylation. How demethylating enzymes are targeted to specific genomic loci remains largely unknown. We show that an antisense lncRNA, termed TARID (for TCF21 antisense RNA inducing demethylation), activates TCF21 expression by inducing promoter demethylation. TARID interacts with both the TCF21 promoter and GADD45A (growth arrest and DNA-damage-inducible, alpha), a regulator of DNA demethylation. GADD45A in turn recruits thymine-DNA glycosylase for base excision repair-mediated demethylation involving oxidation of 5-methylcytosine to 5-hydroxymethylcytosine in the TCF21 promoter by ten-eleven translocation methylcytosine dioxygenase proteins. The results reveal a function of lncRNAs, serving as a genomic address label for GADD45A-mediated demethylation of specific target genes.
[1] The winter period is seldom included in the estimates of aquatic-atmospheric carbon exchange. In this study we quantified the flux of carbon dioxide (CO 2 ) and methane (CH 4 ) over 3 years from 12 small subarctic lakes. The lakes accumulated consistent and high amounts of CO 2 and CH 4 (56-97% as CO 2 ) over the winter, resulting in a high flux during ice thaw. The CO 2 flux during ice thaw increased with increasing mean depth of the lakes, while the CH 4 flux was high in lakes surrounded by mires. The ice thaw period was quantitatively important to the annual gas balances of the lakes. For nine of the lakes, 11 to 55% of the annual flux occurred during thaw. For three of the lakes with an apparent net annual CO 2 uptake, including the thaw period reversed the balance from sink to source. Our results suggest that the ice thaw period is critically important for the emissions of CO 2 and CH 4 in small lakes. Citation: Karlsson, J., R. Giesler, J. Persson, and E. Lundin (2013), High emission of carbon dioxide and methane during ice thaw in high latitude lakes,
[1] Northern inland waters emit CO 2 and CH 4 to the atmosphere but the importance of these emissions is poorly understood due to a lack of integrated catchment-scale estimates of carbon (C) emissions from lakes and streams. In this study we quantified the annual emission of CO 2 and CH 4 from 27 lakes and 23 stream segments in a 15 km 2 subarctic catchment in northern Sweden. All lakes and streams were net sources of C to the atmosphere on an annual basis. Streams dominated (96%) the aquatic CO 2 emission while lakes (61%) dominated the aquatic CH 4 emission. Total aquatic C emission from the catchment was estimated to be 9.1 g C m À2 yr À1 (98% as CO 2 ). Although streams only accounted for 4% of the aquatic area in the catchment, they accounted for 95% of the total emission. The C emissions from lakes and streams were considerably larger than previously reported downstream waterborne export of C from the catchment, indicating that the atmospheric losses of C in the aquatic systems are an important component in the catchment C balance.
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