We propose schemes of controlled-Z and controlled-NOT gates with ultracold neutral atoms based on deterministic phase accumulation during double adiabatic passage of the Stark-tuned Förster resonance of Rydberg states. The effect of deterministic phase accumulation during double adiabatic passage in a two-level quantum system has been analyzed in detail. Adiabatic rapid passage using nonlinearly chirped pulses with rectangle intensity profile has been discussed. Nonlinear time dependence of the energy detuning from the Förster resonance is used to achieve a high fidelity of population transfer between Rydberg states. Fidelity of two-qubit gates has been studied with an example of the 90S + 96S → 90P + 95P Stark-tuned Förster resonance in Cs Rydberg atoms.

We discuss methods for coherently controlling mesoscopic atomic ensembles where the number of atoms varies randomly from one experimental run to the next. The proposed schemes are based on adiabatic passage and Rydberg blockade and can be used for implementation of a scalable quantum register formed by an array of randomly loaded optical dipole traps.

We present schemes for geometric phase compensation in an adiabatic passage which can be used for the implementation of quantum logic gates with atomic ensembles consisting of an arbitrary number of strongly interacting atoms. Protocols using double sequences of stimulated Raman adiabatic passage (STIRAP) or adiabatic rapid passage (ARP) pulses are analyzed. Switching the sign of the detuning between two STIRAP sequences, or inverting the phase between two ARP pulses, provides state transfer with well-defined amplitude and phase independent of atom number in the Rydberg blockade regime. Using these pulse sequences we present protocols for universal single-qubit and two-qubit operations in atomic ensembles containing an unknown number of atoms.