In this work we tested two reagent kits developed by us for detecting SARS-CoV-2 RNA using a fragment of the ORF1ab gene in digital PCR and real-time PCR formats. Data were obtained on the detection of SARS-CoV-2 virus RNA in nasopharyngeal swabs of patients with COVID-19 and asymptomatic carriers. The developed reagent kits provided 100% sensitivity and a detection limit of 103 GE / ml for qPCR, and at least 200 copies / ml of viral RNA when performing digital PCR. These methods were tested using a panel of 1,328 samples collected from patients with suspected COVID-19 at the beginning of 2020 in the Russian Federation. It has been shown that dPCR is more sensitive and can be used to analyze samples with low viral load, including those from patients without clinical symptoms. dPCR significantly improves the accuracy of laboratory research and significantly reduces the number of false negative results in the diagnosis of SARS-CoV-2. Determination of the concentration of SARS-CoV-2 RNA in patients with different clinical course of the disease showed that the concentration of viral RNA can sharply decrease in the first days of the disease. A low concentration of viral RNA in samples from patients is also characteristic of asymptomatic disease. Digital PCR provides a higher detection rate for asymptomatic cases, which is approximately 75% of those infected, as opposed to 45% for real-time PCR. The results obtained on the use of the digital PCR method for detecting SARS-CoV-2 RNA showed that this method is especially suitable for detecting RNA in case of its low concentration in contacts, as well as for monitoring changes in viral load in convalescent patients.
In this work, we considered mixtures of ethanol and water in the form of jets as samples for THz generation based on laser-induced filamentation. The dependence of the output energy of terahertz radiation on the concentration of ethanol in water was experimentally studied. It is shown that the energy grows linearly, which can be explained by an increase in the ionization energy due to the linear replacement of low-efficient charge carriers (water) with highlyefficient (ethanol). The dependence of the THz generation on the optical angle of incidence on the mixture jets was also demonstrated. The results of this study can be further used to create universal source of terahertz radiation.
Emerging laser plasma-based technologies require new knowledge on the optical pump optimization and underlying physics of laser–matter interaction. Plasma in liquid jets is still largely unexplored, although this configuration is actively used as a part of optical devices. Hereby, in this work, we report on the reflectivity-based approach to study the optical properties of the induced plasma and quasi-free electron temporal dynamics. The single-shot experiments provide plasma characteristics relative to the laser pump parameters. A strong angular dependence of the plasma absorptivity, which affects rigorously the reflectivity curve, is demonstrated. Furthermore, twofold higher plasma reflectivity in ethanol is revealed and explained through the theoretical model of ultrashort laser pulse interaction with a thin dielectric surface layer. Finally, the time-resolved fundamental and third harmonic reflection measurements and associated analytical study provide the new insight into the electron density dynamics in the case of optical breakdown in water and ethanol. We believe that these findings are of particular significance for the development of highly efficient plasma-based x rays and THz radiation sources.
This work is intended to take the first step to study the effect of input laser wavelength on the efficiency of liquidbased THz radiation sources. The numerical simulation data indicate a real opportunity to improve the existing sources. However, the resulting gain is not as significant as in the case of the two-color air filament, which points out at the need for further optimization.
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