JURECA is a petaflop-scale modular supercomputer operated by Jülich Supercomputing Centre at Forschungszentrum Jülich. The system combines a flexible Cluster module, based on T-Platforms V-Class blades with a balanced selection of best of its kind components, with a scalability focused Booster module, delivered by Intel and Dell EMC based on the Xeon Phi many-core processor. With its novel architecture, it supports a wide variety of high-performance computing and data analytics workloads.
JURECA is a peta op-scale, general-purpose supercomputer operated by Jülich Supercomputing Centre at Forschungszentrum Jülich. Utilizing a exible cluster architecture based on T-Platforms V-Class blades and a balanced selection of best of its kind components the system supports a wide variety of high-performance computing and data analytics workloads and o ers a low entrance barrier for new users.
AimsLeft-ventricular (LV) conduction disturbances are common in heart-failure patients and a left bundle-branch block (LBBB) electrocardiogram (ECG) type is often seen. The precise cause of this pattern is uncertain and is probably variable between patients, ranging from proximal interruption of the left bundle branch to diffuse distal conduction disease in the working myocardium. Using realistic numerical simulation methods and patient-tailored model anatomies, we investigated different hypotheses to explain the observed activation order on the LV endocardium, electrogram morphologies, and ECG features in two patients with heart failure and LBBB ECG.Methods and resultsVentricular electrical activity was simulated using reaction–diffusion models with patient-specific anatomies. From the simulated action potentials, ECGs and cardiac electrograms were computed by solving the bidomain equation. Model parameters such as earliest activation sites, tissue conductivity, and densities of ionic currents were tuned to reproduce the measured signals. Electrocardiogram morphology and activation order could be matched simultaneously. Local electrograms matched well at some sites, but overall the measured waveforms had deeper S-waves than the simulated waveforms.ConclusionTuning a reaction–diffusion model of the human heart to reproduce measured ECGs and electrograms is feasible and may provide insights in individual disease characteristics that cannot be obtained by other means.
JUWELS is a multi-petaflop modular supercomputer operated by Jülich Supercomputing Centre at Forschungszentrum Jülich as a European and national supercomputing resource for the Gauss Centre for Supercomputing. In addition, JUWELS serves the Earth system modeling community within the Helmholtz Association. The first module deployed in 2018, is a Cluster module based on the BullSequana X1000 architecture with Intel Xeon Skylake-SP processors and Mellanox EDR InfiniBand. An extension by a second Booster module is scheduled for deployment in 2020.
Uncoupling in the working myocardium can mimic left-sided block in the ventricular conduction system and can explain an LBBB ECG pattern with relatively low amplitude. Biventricular pacing improves ventricular activation in true LBBB with or without uncoupling but not in case of 50% uncoupling alone.
Abstract. One of the most challenging problems in dynamic concurrent multiscale simulations is the reflectionless transfer of physical quantities between the different scales. In particular, when coupling molecular dynamics and finite element discretizations in solid body mechanics, often spurious wave reflections are introduced by the applied coupling technique. The reflected waves are typically of high frequency and are arguably of little importance in the domain where the finite element discretization drives the simulation. In this work, we provide an analysis of this phenomenon.Based on the gained insight, we derive a new coupling approach, which neatly separates high and low frequency waves. Whereas low frequency waves are permitted to bridge the scales, high frequency waves can be removed by applying damping techniques without affecting the coupled share of the solution. As a consequence, our new method almost completely eliminates unphysical wave reflections and deals in a consistent way with waves of arbitrary frequencies. The separation of wavelengths is achieved by employing a discrete L 2 -projection, which acts as a low pass filter. Our coupling constraints enforce matching in the range of this projection. With respect to the numerical realization this approach has the advantage of a small number of constraints, which is computationally efficient. Numerical results in one and two dimensions confirm our theoretical findings and illustrate the performance of our new weak coupling approach.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.