A theoretical study of the mechanism and kinetics of the inner double hydrogen atom-transfer process in free base porphyrin is presented. Our analysis reveals that the stepwise mechanism first requires the porphyrin ring to compress at an approximate cost of 8.7 kcal/mol, followed by transfer of a H atom with an additional energy requirement of 8.2 kcal/mol. Solvent effects were investigated using a dielectric continuum model and found to be small. The forward and reverse rate constants for the hydrogen atom-transfer process of trans-isomer ↔ cis-isomer were calculated using a canonical variational transition-state theory augmented by multidimensional semiclassical tunneling approximations in the temperature range of 200−1000 K. The calculated activation energy of 10.8 kcal/mol in the temperature range of 200−300 K agrees well with the available experimental data. We found that tunneling is significant for both the forward and reverse trans ↔ cis tautomerization processes, especially in the low-temperature range.
A systematic study on the structure and stability of nitrate anion hydrated clusters, NO3(-) x n H2O (n = 1-8) are carried out by applying first principle electronic structure methods. Several possible initial structures are considered for each size cluster to locate equilibrium geometry by applying a correlated hybrid density functional with 6-311++G(d,p) basis function. Three different types of arrangements, namely, symmetrical double hydrogen bonding, single hydrogen bonding and inter-water hydrogen bonding are obtained in these hydrated clusters. A structure having inter-water hydrogen bonding is more stable compared to other arrangements. Surface structures are predicted to be more stable over interior structures. Up to five solvent H2O molecules can stay around solute NO3(-) anion in structures having an inter-water hydrogen-bonded cyclic network. A linear correlation is obtained for weighted average solvent stabilization energy with the size (n) of the hydrated cluster. Distinctly different shifts of IR bands are observed in these hydrated clusters for different kinds of bonding environments of O-H and N=O stretching modes compared to isolated H2O and NO3(-) anion. Weighted average IR spectra are calculated on the basis of statistical population of individual configurations of each size cluster at 150 K.
Photophysical investigations of coumarin-7 (C7) dye in different solvents using absorption, steady-state fluorescence and time-resolved fluorescence measurements reveal the behavioral changes of the dye in nonpolar and other solvents. In moderate to higher polarity solvents, the experimental parameters such as fluorescence quantum yield (Phif), fluorescence lifetime (tauf), radiative rate constant (k(f)), nonradiative rate constant (k(nr)) and Stokes' shift (Deltav) follow almost linear correlations with the Lippert-Mataga solvent polarity parameter Deltaf but show unusual deviations in nonpolar solvents. From the observed results, it is inferred that the dye exists in a planar intramolecular charge transfer structure in moderate to higher polarity solvents, but in nonpolar solvents, the dye exists in a nonplanar structure with its 7-NEt2 group adopting a pyramidal type of configuration. Unlike some of the other coumarin dyes, namely coumarin-120 (C120) (4-CH3-7-NH2-1,2-benzopyrone) and coumarin-151 (C151) 4-CF3-7-NH2-1,2-benzopyrone), which also show similar structural changes in nonpolar and other solvents, the C7 dye does not show any activation-controlled deexcitation process in nonpolar solvents. This is attributed to the very slow flip-flop motion of the 7-NEt2 group of the C7 dye in comparison with the very fast flip-flop motion of the 7-NH2 group in the C120 and C151 dyes. Qualitative potential energy diagrams are presented to rationalize the observed results of C7 dye and to compare these with those of the other dyes such as C120 and C151. A support for the observed results and interpretation has also been obtained from quantum chemical calculations on the structures of the C7 dye.
A theoretical study on the nature of bonding in several weakly bound radical cation complexes from second and third row hydrides is presented. It is shown that characterization of a two-center three-electron or 2c-3e bond based on its bond distance and binding energy may be misleading in many cases. It is also observed that the ab inito quantum chemical bond order index cannot be taken as a definite signature of a 2c-3e bond. Instead, it is suggested that appropriate localized molecular orbital need be used to test the presence of a 2c-3e bond. Localization of relevant molecular orbital in the 2c-3e bonded systems also suggests that the newly formed bond is of sigma character. Normal-mode analysis is performed to identify the stretching mode in the 2c-3e bonded radical cation complexes. Geometry optimizations are carried out at MP2 and restricted open shell Becke's half-and-half (BHH) nonlocal exchange and Lee-Yang-Parr (LYP) nonlocal correlation functionals (BHHLYP) with 6-31++G(d,p) basis set. Hessian calculations are done at the BHHLYP level. Excited-state calculations are performed following the configuration interaction with single electron excitation (CIS) method, and the lowest optical transition wavelengths (λ max ) in the 2c-3e bonded complexes are reported. BHHLYP functionals have been found to describe the 2c-3e bonded systems well within the restricted open shell formalism.
A metal-organic framework (MOF) of cadmium(ii) is reported here which is the first example of an experimentally achieved MOF based electronic device, and in the present case it is a Schottky diode.
Supramolecular host-guest interaction of neutral and cationic (protonated) forms of two boron-dipyromethane (BODIPY)-benzimidazole (mono- and di-benzimidazole) conjugate dyes with the macrocyclic host cucurbit[7]uril (CB7) has been investigated using photophysical and density functional theory studies. Expectedly, cationic forms of the dyes show exceptionally stronger binding than that of the neutral forms with CB7, which can be ascribed to the strong ion-dipole interaction between the positive charge of the dye and the highly polarizable carbonyl portals of the host. The formation of dye-host inclusion complexes is supported by the significant changes in the photophysical properties and longer rotational relaxation times of the dye in the presence of CB7. Job's plot studies indicate the formation of a 1:1 inclusion complex for the mono and a 1:2 inclusion complex for the dibenzimidazole BODIPY dyes. Quantum chemical calculations are in good agreement with the inferences outlined from photophysical measurements. Findings from the studied dye-CB7 systems are of direct relevance to applications such as drug delivery, aqueous dye lasers, sensors, and so on.
Syntheses, structural characterizations, photoluminescence, and adsorption properties of three new azo-functionalized Cd(II)-MOFs, namely, {[Cd(azbpy)(msuc)]·2.5(HO)} (2), {[Cd(azbpy)(mglu)]·5(HO)} (3), and {[Cd(azbpy)(glu)]·(NO)·MeOH} (4) [where msuc = methylsuccinate; mglut = methylglutarate; glut = glutarate; azbpy = 4,4'-azobispyridine] have been reported. The compounds show different structures only with the variation of aliphatic dicarboxylates. The photoswitching behavior for the above-mentioned newly synthesized Cd(II)-MOFs along with one of our previously reported other azo-functionalized Cd(II)-MOF, namely, {[Cd(azbpy)(suc)]·2(HO)} (1), has been studied extensively. At photoilluminated condition, the conductivity values can draw a clear structure-property relationship among the structures of compounds 1-4. Single crystal structural analysis reveals that all the compounds exhibit a three-dimensional (3D) framework connected by azbpy linker and respective aliphatic dicarboxylate through their bis-chelating mono/bis oxo-bridging fashion. Compounds 1-3 exhibit an iso-structural honeycomb like 3D framework showing the same coordination environments, where the metal-carboxylate 2D sheets of compounds 1-3 are pillared by N,N'-donor azbpy linkers. On the other hand, compound 4 exhibits a 2-fold interpenetrated 3D framework with a little difference in its coordination environment and the pillaring of 1D metal-carboxylate ladder by azbpy linkers. All the compounds significantly demonstrate their enhanced sensitivity under light rather than the dark condition. The gas and solvent vapor sorption studies have been performed for the synthesized compounds 2-4. Moreover, compound 2 exhibits an enhanced type IV selective CO adsorption isotherm over N along with the appearance of gate opening phenomena in that.
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